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核糖体失活蛋白识别与切割DNA的拓扑学要求。

Topological requirements for recognition and cleavage of DNA by ribosome-inactivating proteins.

作者信息

Ling J, Li X, Wu X, Liu W

机构信息

Shanghai Institute of Biochemistry, Academia Sinica, China.

出版信息

Biol Chem Hoppe Seyler. 1995 Nov;376(11):637-41. doi: 10.1515/bchm3.1995.376.11.637.

DOI:10.1515/bchm3.1995.376.11.637
PMID:8962672
Abstract

Ribosome-inactivating proteins (RIPs) were demonstrated to exhibit a unique enzymatic activity on cleaving supercoiled double-stranded DNA into the nicked or linear form. Although there is an interaction between supercoiled DNA and RIP, no sequence-specific recognition was involved. Instead, RIPs recognize supercoiled DNA by conformational specificity. Negatively supercoiled DNA is the preferential conformation in the action of RIPs. When double-stranded DNA occurs in the supercoiled form, even if with lower linking number, RIPs can still convert it into nicked or linear form. Terminal-labelling experiments indicated that radioactivity was incorporated into putative 5'-ends of nicked or linear DNA generated by RIPs. We conclude that RIPs act as a novel supercoil-dependent endonuclease when they cleavage supercoiled DNA. The impossibility that contaminating enzymes in the RIP preparations cleaved the supercoiled DNA is briefly discussed.

摘要

核糖体失活蛋白(RIPs)被证明对将超螺旋双链DNA切割成带切口或线性形式具有独特的酶活性。尽管超螺旋DNA与RIP之间存在相互作用,但不涉及序列特异性识别。相反,RIPs通过构象特异性识别超螺旋DNA。负超螺旋DNA是RIPs作用中的优先构象。当双链DNA以超螺旋形式存在时,即使连接数较低,RIPs仍可将其转化为带切口或线性形式。末端标记实验表明,放射性被掺入由RIPs产生的带切口或线性DNA的推定5'末端。我们得出结论,当RIPs切割超螺旋DNA时,它们作为一种新型的依赖超螺旋的内切核酸酶起作用。文中简要讨论了RIP制剂中污染酶切割超螺旋DNA的可能性。

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Topological requirements for recognition and cleavage of DNA by ribosome-inactivating proteins.核糖体失活蛋白识别与切割DNA的拓扑学要求。
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引用本文的文献

1
Research on ribosome-inactivating proteins from angiospermae to gymnospermae and cryptogamia.从被子植物到裸子植物和隐花植物的核糖体失活蛋白研究。
Am J Transl Res. 2017 Dec 15;9(12):5719-5742. eCollection 2017.
2
Toxin-based therapeutic approaches.基于毒素的治疗方法。
Toxins (Basel). 2010 Nov;2(11):2519-83. doi: 10.3390/toxins2112519. Epub 2010 Oct 28.
3
Type-1 ribosome-inactivating protein from iris (Iris hollandica var. Professor Blaauw) binds specific genomic DNA fragments.来自鸢尾(荷兰鸢尾变种Blaauw教授)的1型核糖体失活蛋白可结合特定的基因组DNA片段。
Biochem J. 2001 Aug 1;357(Pt 3):875-80. doi: 10.1042/0264-6021:3570875.
4
An additional mechanism of ribosome-inactivating protein cytotoxicity: degradation of extrachromosomal DNA.核糖体失活蛋白细胞毒性的另一种机制:染色体外DNA的降解。
Biochem J. 1997 Oct 15;327 ( Pt 2)(Pt 2):413-7. doi: 10.1042/bj3270413.