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Increased numbers of primed activated CD8+CD38+CD45RO+ T cells predict the decline of CD4+ T cells in HIV-1-infected patients.在HIV-1感染患者中,初始激活的CD8+CD38+CD45RO+ T细胞数量增加预示着CD4+ T细胞数量下降。
AIDS. 1996 Jul;10(8):827-34. doi: 10.1097/00002030-199607000-00005.
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Nucleotide substitution patterns can predict the requirements for drug-resistance of HIV-1 proteins.核苷酸替换模式可以预测HIV-1蛋白的耐药性需求。
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Human immunodeficiency virus fitness in vivo: calculations based on a single zidovudine resistance mutation at codon 215 of reverse transcriptase.人类免疫缺陷病毒在体内的适应性:基于逆转录酶第215位密码子单个齐多夫定耐药性突变的计算。
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Anti-CD4 therapy for AIDS suggested by mathematical models.数学模型提示的艾滋病抗CD4疗法
Proc Biol Sci. 1996 Jul 22;263(1372):899-905. doi: 10.1098/rspb.1996.0133.
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Changing the natural history of HIV disease.改变HIV疾病的自然史。
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Reduced replication of 3TC-resistant HIV-1 variants in primary cells due to a processivity defect of the reverse transcriptase enzyme.由于逆转录酶的持续合成能力缺陷,3TC耐药性HIV-1变体在原代细胞中的复制减少。
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Thymic-independent T cell regeneration occurs via antigen-driven expansion of peripheral T cells resulting in a repertoire that is limited in diversity and prone to skewing.非胸腺依赖性T细胞再生通过外周T细胞的抗原驱动性扩增发生,导致T细胞库多样性有限且易于偏移。
J Immunol. 1996 Jun 15;156(12):4609-16.
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Host-parasite dynamics and outgrowth of virus containing a single K70R amino acid change in reverse transcriptase are responsible for the loss of human immunodeficiency virus type 1 RNA load suppression by zidovudine.
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9
HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time.体内HIV-1动态变化:病毒体清除率、受感染细胞寿命及病毒生成时间。
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10
HIV infection is active and progressive in lymphoid tissue during the clinically latent stage of disease.在疾病的临床潜伏期,HIV感染在淋巴组织中活跃且呈进行性发展。
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通过数学模型解释的1型人类免疫缺陷病毒逆转录酶抗性突变体的临床数据集。

Clinical data sets of human immunodeficiency virus type 1 reverse transcriptase-resistant mutants explained by a mathematical model.

作者信息

Stilianakis N I, Boucher C A, De Jong M D, Van Leeuwen R, Schuurman R, De Boer R J

机构信息

Theoretical Division, Group T-10, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA.

出版信息

J Virol. 1997 Jan;71(1):161-8. doi: 10.1128/JVI.71.1.161-168.1997.

DOI:10.1128/JVI.71.1.161-168.1997
PMID:8985335
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC191036/
Abstract

Treatment of human immunodeficiency virus type 1 (HIV-1) infection during the clinical latency phase with drugs inhibiting reverse transcriptase (RT) reduces the HIV-1 RNA load and increases the CD4+ T-cell count. Typically, however, the virus evolves mutations in the RT gene that circumvent the drugs. We develop a mathematical model for this situation. The model distinguishes quiescent from activated CD4+ T cells, incorporates the fact that only activated cells can become productively infected by HIV-1, embodies empirical estimates for the drug resistance and the mutation frequency for each of the HIV-1 drug-resistant mutants, and assumes the antiviral immune response to remain constant over the course of the experiments. We analyze clinical data on the evolution of drug-resistant mutants for the RT inhibitors lamivudine and zidovudine. The results show that the evolutionary sequence of the drug-resistant mutants in both data sets is accounted for by our model, given that lamivudine is more effective than zidovudine. Thus, current empirical estimates of the mutation frequencies and the drug resistances of the mutants suffice for explaining the data. We derive a critical treatment level below which the wild-type HIV-1 RNA load can rebound before the first drug-resistant mutant appears. Our zidovudine data confirm this to be the case. Thus, we demonstrate in the model and the data that the rebound of the HIV-1 RNA load in the case of zidovudine is due to the outgrowth of wild-type virus and the first drug-resistant mutant, whereas that in the case of lamivudine can only be due to the drug-resistant mutants. The evolution of drug resistance proceeds slower in the case of zidovudine because (i) zidovudine is not as effective as lamivudine and (ii) the first zidovudine drug-resistant mutant is competing with the rebounding wild-type virus.

摘要

在临床潜伏期使用抑制逆转录酶(RT)的药物治疗人类免疫缺陷病毒1型(HIV-1)感染,可降低HIV-1 RNA载量并增加CD4+ T细胞计数。然而,通常情况下,病毒会在RT基因中发生突变,从而规避这些药物。我们针对这种情况开发了一个数学模型。该模型区分了静止的和活化的CD4+ T细胞,纳入了只有活化细胞才能被HIV-1有效感染这一事实,体现了对每种HIV-1耐药突变体的耐药性和突变频率的经验估计,并假设抗病毒免疫反应在实验过程中保持不变。我们分析了拉米夫定和齐多夫定这两种RT抑制剂耐药突变体进化的临床数据。结果表明,鉴于拉米夫定比齐多夫定更有效,我们的模型能够解释两个数据集中耐药突变体的进化序列。因此,目前对突变频率和突变体耐药性的经验估计足以解释这些数据。我们推导出了一个临界治疗水平,低于该水平时,野生型HIV-1 RNA载量在第一个耐药突变体出现之前就可能反弹。我们的齐多夫定数据证实了这种情况。因此,我们在模型和数据中证明,齐多夫定情况下HIV-1 RNA载量的反弹是由于野生型病毒和第一个耐药突变体的增殖,而拉米夫定情况下则只能归因于耐药突变体。齐多夫定情况下耐药性的进化较慢,原因如下:(i)齐多夫定不如拉米夫定有效;(ii)第一个齐多夫定耐药突变体与反弹的野生型病毒相互竞争。