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Motional properties of a pentasaccharide containing a 2,6-branched mannose residue as studied by 13C nuclear spin relaxation.
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Characterization of the extent of internal motions in oligosaccharides.寡糖内部运动程度的表征
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Conformations and internal mobility of a glycopeptide derived from bromelain using molecular dynamics simulations and NOESY analysis.利用分子动力学模拟和NOESY分析研究源自菠萝蛋白酶的糖肽的构象和内部流动性。
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Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteins.相敏二维相关光谱法(COSY)在蛋白质中¹H-¹H自旋-自旋耦合常数测量中的应用。
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通过碳-13核磁共振研究人血清转铁蛋白中一种糖肽的分子运动。

Molecular motions of a glycopeptide from human serum transferrin studied by 13C nuclear magnetic resonance.

作者信息

Lu J, Van Halbeek H

机构信息

Complex Carbohydrate Research Center, University of Georgia, Athens 30602, USA.

出版信息

Biophys J. 1997 Jan;72(1):470-81. doi: 10.1016/S0006-3495(97)78688-0.

DOI:10.1016/S0006-3495(97)78688-0
PMID:8994634
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1184338/
Abstract

The molecular motions of a 21-amino-acid glycopeptide (Gp21) containing multiple glycoforms of an N-linked diantennary oligosaccharide were studied by two-dimensional 1H-detected 13C relaxation measurements at natural abundance. Gp21 was derived from human serum transferrin, its amino acid sequence is QQQHLFGSNVTDCSGNFCLFR, and its N-glycan structure is [Formula: see text] The measured longitudinal and transverse relaxation rate constants and the nuclear Overhauser enhancements for the methine carbons of Gp21 were analyzed by using the model-free approach to obtain information about the internal motions in the molecule. The calculated order parameters S2 of the alpha carbons in both NH2- and COOH-terminal segments of the peptide are smaller than those in the interior segment of the Gp21 peptide moiety, implying that the internal motions in the terminal segments are less restricted than in the interior segment. The average S2 value is 0.72-0.91 for the glycosyl residues in the pentasaccharide core of Gp21, 0.58-0.59 for the interior GlcNAc-5,5' residues in the two branches, and 0.35-0.51 for the terminal GlcNAc-5, Gal-6,6', and NeuAcN,N' residues in the two branches, indicating that the internal motions in the glycan core are more restricted than in the two branches.

摘要

通过二维¹H检测¹³C弛豫测量,在天然丰度下研究了一种含有N - 连接双天线寡糖多种糖型的21个氨基酸的糖肽(Gp21)的分子运动。Gp21源自人血清转铁蛋白,其氨基酸序列为QQQHLFGSNVTDCSGNFCLFR,其N - 聚糖结构为[化学式:见正文]。通过使用无模型方法分析测量得到的Gp21次甲基碳的纵向和横向弛豫速率常数以及核Overhauser增强,以获取有关分子内部运动的信息。肽段NH₂ - 和COOH - 末端片段中α碳的计算序参数S₂小于Gp21肽部分内部片段中的序参数,这意味着末端片段中的内部运动比内部片段受限制更少。Gp21五糖核心中糖基残基的平均S₂值为0.72 - 0.91,两个分支中内部GlcNAc - 5,5'残基的平均S₂值为0.58 - 0.59,两个分支中末端GlcNAc - 5、Gal - 6,6'和NeuAcN,N'残基的平均S₂值为0.35 - 0.51,表明聚糖核心中的内部运动比两个分支中更受限制。