• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

E-state fields: applications to 3D QSAR.

作者信息

Kellogg G E, Kier L B, Gaillard P, Hall L H

机构信息

Department of Medicinal Chemistry, Virginia Commonwealth University, Richmond 23298-0540, USA.

出版信息

J Comput Aided Mol Des. 1996 Dec;10(6):513-20. doi: 10.1007/BF00134175.

DOI:10.1007/BF00134175
PMID:9007685
Abstract

The derivation of a new 3D QSAR field based on the electrotopological state (E-state) formalism is described. A complementary index and its associated field, the HE-state, describing the polarity of hydrogens is also defined. These new fields are constructed from a nonempirical index that incorporates electronegativity, the inductive influence of neighboring atoms, and the topological state into a single atomistic descriptor. The classic CoMFA steroid test data set was examined with models incorporating the E-state and HE-state fields alone and in combination with steric, electrostatic and hydropathic fields. The single best model was the E-state/HE-state combination with q2 = 0.803 (three components) and r2 = 0.979. Using the E-state and/or HE-state fields with other fields consistently produced models with improved statistics, where the E-state fields provided a significant, if not dominant, contribution.

摘要

相似文献

1
E-state fields: applications to 3D QSAR.
J Comput Aided Mol Des. 1996 Dec;10(6):513-20. doi: 10.1007/BF00134175.
2
QSAR study of steroid benchmark and dipeptides based on MEDV-13.基于MEDV-13的甾体基准和二肽的定量构效关系研究
J Chem Inf Comput Sci. 2001 Mar-Apr;41(2):321-9. doi: 10.1021/ci0003350.
3
3D-QSAR of human immunodeficiency virus (I) protease inhibitors. III. Interpretation of CoMFA results.人类免疫缺陷病毒(I)蛋白酶抑制剂的3D-QSAR。III. CoMFA结果解读。
Drug Des Discov. 1994 Jul;12(1):29-51.
4
Three-dimensional quantitative structure-activity relationships of steroid aromatase inhibitors.甾体芳香酶抑制剂的三维定量构效关系
J Comput Aided Mol Des. 1996 Jun;10(3):186-200. doi: 10.1007/BF00355042.
5
Comparison of estrogen receptor alpha and beta subtypes based on comparative molecular field analysis (CoMFA).基于比较分子场分析(CoMFA)的雌激素受体α和β亚型比较
SAR QSAR Environ Res. 1999;10(2-3):215-37. doi: 10.1080/10629369908039177.
6
Modeling the cytochrome P450-mediated metabolism of chlorinated volatile organic compounds.
Drug Metab Dispos. 1996 Feb;24(2):203-10.
7
3D QSAR based design of novel oxindole derivative as 5HT7 inhibitors.基于3D QSAR的新型羟吲哚衍生物作为5HT7抑制剂的设计
J Recept Signal Transduct Res. 2014 Jun;34(3):185-94. doi: 10.3109/10799893.2013.869601. Epub 2014 Jan 23.
8
Study of the binding affinity for corticosteroid-binding globulin (CBG) using the electron topological method (ETM) as three-dimensional quantitative structure-activity relationship (3D QSAR).使用电子拓扑方法(ETM)作为三维定量构效关系(3D QSAR)研究皮质类固醇结合球蛋白(CBG)的结合亲和力。
Bioorg Med Chem. 2003 Oct 1;11(20):4383-8. doi: 10.1016/s0968-0896(03)00461-9.
9
Developing 13C NMR quantitative spectrometric data-activity relationship (QSDAR) models of steroid binding to the corticosteroid binding globulin.
J Comput Aided Mol Des. 2001 Jul;15(7):659-69. doi: 10.1023/a:1011959120313.
10
CoMFA and CoMSIA 3D QSAR analysis on N1-arylsulfonylindole compounds as 5-HT6 antagonists.作为5-HT6拮抗剂的N1-芳基磺酰基吲哚化合物的比较分子场分析(CoMFA)和比较分子相似性指数分析(CoMSIA)三维定量构效关系研究
Bioorg Med Chem. 2004 Aug 1;12(15):3977-85. doi: 10.1016/j.bmc.2004.06.007.

引用本文的文献

1
QuBiLS-MAS, open source multi-platform software for atom- and bond-based topological (2D) and chiral (2.5D) algebraic molecular descriptors computations.QuBiLS-MAS,一款用于基于原子和键的拓扑(二维)和手性(2.5维)代数分子描述符计算的开源多平台软件。
J Cheminform. 2017 Jun 7;9(1):35. doi: 10.1186/s13321-017-0211-5.
2
Continuous indicator fields: a novel universal type of molecular fields.连续指标场:一种新型的通用分子场类型。
J Comput Aided Mol Des. 2015 Mar;29(3):233-47. doi: 10.1007/s10822-014-9818-z. Epub 2014 Dec 2.
3
The continuous molecular fields approach to building 3D-QSAR models.

本文引用的文献

1
Comparative molecular field analysis (CoMFA). 1. Effect of shape on binding of steroids to carrier proteins.比较分子场分析(CoMFA)。1. 形状对类固醇与载体蛋白结合的影响。
J Am Chem Soc. 1988 Aug 1;110(18):5959-67. doi: 10.1021/ja00226a005.
2
Derivation and significance of valence molecular connectivity.价分子连接性的推导及其意义
J Pharm Sci. 1981 Jun;70(6):583-9. doi: 10.1002/jps.2600700602.
3
An electrotopological-state index for atoms in molecules.分子中原子的电子拓扑状态指数。
连续分子场方法构建 3D-QSAR 模型。
J Comput Aided Mol Des. 2013 May;27(5):427-42. doi: 10.1007/s10822-013-9656-4. Epub 2013 May 30.
4
Development, validation, and use of quantitative structure-activity relationship models of 5-hydroxytryptamine (2B) receptor ligands to identify novel receptor binders and putative valvulopathic compounds among common drugs.开发、验证和应用 5-羟色胺(2B)受体配体的定量构效关系模型,以鉴定常见药物中的新型受体结合物和潜在的瓣膜病变化合物。
J Med Chem. 2010 Nov 11;53(21):7573-86. doi: 10.1021/jm100600y.
5
Quantitative and qualitative models for carcinogenicity prediction for non-congeneric chemicals using CP ANN method for regulatory uses.应用 CP ANN 方法对非同类化学物质进行致癌性定量和定性预测的定量和定性模型,以供监管用途。
Mol Divers. 2010 Aug;14(3):581-94. doi: 10.1007/s11030-009-9190-4. Epub 2009 Aug 15.
6
QSAR modeling of the blood-brain barrier permeability for diverse organic compounds.多种有机化合物血脑屏障通透性的定量构效关系建模
Pharm Res. 2008 Aug;25(8):1902-14. doi: 10.1007/s11095-008-9609-0. Epub 2008 Jun 14.
7
Development of quantitative structure-binding affinity relationship models based on novel geometrical chemical descriptors of the protein-ligand interfaces.基于蛋白质-配体界面新型几何化学描述符的定量结构-结合亲和力关系模型的开发。
J Med Chem. 2006 May 4;49(9):2713-24. doi: 10.1021/jm050260x.
8
Markovian chemicals "in silico" design (MARCH-INSIDE), a promising approach for computer-aided molecular design III: 2.5D indices for the discovery of antibacterials.马尔可夫化学物质“虚拟”设计(MARCH-INSIDE),一种用于计算机辅助分子设计的有前景的方法III:用于发现抗菌剂的2.5D指数
J Mol Model. 2005 Mar;11(2):116-23. doi: 10.1007/s00894-004-0228-3. Epub 2005 Feb 19.
9
Quantitative structure-activity relationships from optimised ab initio bond lengths: steroid binding affinity and antibacterial activity of nitrofuran derivatives.
J Comput Aided Mol Des. 2004 Feb;18(2):135-43. doi: 10.1023/b:jcam.0000030036.67468.7c.
10
Human cellular nucleic acid-binding protein Zn2+ fingers support replication of human immunodeficiency virus type 1 when they are substituted in the nucleocapsid protein.当人细胞核酸结合蛋白的锌指结构被替换到核衣壳蛋白中时,可支持1型人类免疫缺陷病毒的复制。
J Virol. 2003 Aug;77(15):8524-31. doi: 10.1128/jvi.77.15.8524-8531.2003.
Pharm Res. 1990 Aug;7(8):801-7. doi: 10.1023/a:1015952613760.
4
HINT: a new method of empirical hydrophobic field calculation for CoMFA.提示:一种用于比较分子力场分析(CoMFA)的经验疏水场计算新方法。
J Comput Aided Mol Des. 1991 Dec;5(6):545-52. doi: 10.1007/BF00135313.
5
A quantitative structure-activity relationship (QSAR) study of alkylpyrazine odor modalities.烷基吡嗪气味模式的定量构效关系(QSAR)研究
Pharm Res. 1992 Oct;9(10):1321-3. doi: 10.1023/a:1015865603263.