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昆虫病原线虫斯氏线虫属和异小杆线虫属(线虫纲:小杆目)两种物种特异性串联重复DNA的分子特征分析

Molecular characterization of two species-specific tandemly repeated DNAs from entomopathogenic nematodes Steinernema and Heterorhabditis (Nematoda:Rhabditida).

作者信息

Grenier E, Laumond C, Abad P

机构信息

Laboratoire de Biologie des Invertébrés, INRA, BP 2078, Antibes, France.

出版信息

Mol Biochem Parasitol. 1996 Dec 2;83(1):47-56. doi: 10.1016/s0166-6851(96)02747-8.

Abstract

Two AluI tandemly repeated DNAs were cloned from two entomopathogenic nematodes: the first one from Steinernema glaseri and the second one from Heterorhabditis bacteriophora. The monomeric units of these two satellite DNAs have a repeat length of 174 and 168 bp, respectively. These AluI repeated element families appear to constitute 5.5% of the S. glaseri genome and 5% of the H. bacteriophora genome. Their A + T contents were estimated at 55% and 57%. Moreover, the monomers of these two families are quite homogeneous in sequence, showing, on average, 3.9% and 2.7% divergence from their respective consensus sequence. These results suggest that some mechanism is acting to maintain the homogeneity of these repeated DNAs despite their abundance. We have also shown that these two DNA families are species-specific and therefore could be used for the identification of Steinernema and Heterorhabditis entomopathogenic nematode species.

摘要

从两种昆虫病原线虫中克隆出了两个串联重复的AluI DNA:第一个来自格氏斯氏线虫,第二个来自嗜菌异小杆线虫。这两种卫星DNA的单体单元重复长度分别为174和168 bp。这些AluI重复元件家族似乎分别占格氏斯氏线虫基因组的5.5%和嗜菌异小杆线虫基因组的5%。它们的A + T含量估计分别为55%和57%。此外,这两个家族的单体在序列上相当均匀,平均与其各自的共有序列有3.9%和2.7%的差异。这些结果表明,尽管这些重复DNA数量丰富,但仍有某种机制在维持它们的均匀性。我们还表明,这两个DNA家族具有物种特异性,因此可用于鉴定斯氏线虫属和异小杆线虫属的昆虫病原线虫物种。

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