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四氢二吡啶羧酸N-琥珀酰转移酶的三维结构

Three-dimensional structure of tetrahydrodipicolinate N-succinyltransferase.

作者信息

Beaman T W, Binder D A, Blanchard J S, Roderick S L

机构信息

Department of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, USA.

出版信息

Biochemistry. 1997 Jan 21;36(3):489-94. doi: 10.1021/bi962522q.

DOI:10.1021/bi962522q
PMID:9012664
Abstract

The conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA is catalyzed by tetrahydrodipicolinate N-succinyltransferase and is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The X-ray crystal structure of THDP succinyltransferase has been determined to 2.2 A resolution and has been refined to a crystallographic R-factor of 17.0%. The enzyme is trimeric and displays the left-handed parallel beta-helix (L beta H) structural motif encoded by the "hexapeptide repeat" amino acid sequence motif [Raetz, C.R.H., & Roderick, S.L. (1995) Science 270, 997-1000]. The approximate location of the active site of THDP succinyltransferase is suggested by the proximity of binding sites for two inhibitors: p-(chloromercuri)benzenesulfonic acid and cobalt ion, both of which bind to the L beta H domain.

摘要

四氢二吡啶甲酸N -琥珀酰转移酶催化四氢二吡啶甲酸和琥珀酰辅酶A转化为N -琥珀酰四氢二吡啶甲酸和辅酶A,这是细菌合成L -赖氨酸和中-二氨基庚二酸(肽聚糖的一个组成成分)的琥珀酰化途径中的关键步骤。已确定四氢二吡啶甲酸琥珀酰转移酶的X射线晶体结构分辨率为2.2埃,并已精修至晶体学R因子为17.0%。该酶是三聚体,呈现由“六肽重复”氨基酸序列基序编码的左手平行β-螺旋(LβH)结构基序[雷茨,C.R.H.,& 罗德里克,S.L.(1995年)《科学》270,997 - 1000]。两种抑制剂:对-(氯汞基)苯磺酸和钴离子的结合位点靠近,提示了四氢二吡啶甲酸琥珀酰转移酶活性位点的大致位置,这两种抑制剂均与LβH结构域结合。

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