信号识别颗粒数据库（SRPDB）。
The Signal Recognition Particle Database (SRPDB).
作者信息
Zwieb C, Larsen N
机构信息
Department of Molecular Biology, The University of Texas Health Science Center, PO Box 2003, Tyler, TX 75710, USA.
出版信息
Nucleic Acids Res. 1997 Jan 1;25(1):107-8. doi: 10.1093/nar/25.1.107.
Abstract
The SRPDB (Signal Recognition Particle Database) offers aligned SRP RNA and SRP protein sequences, phylogenetically ordered and annotated. This release adds three SRP RNA sequences (totaling 96 SRP RNA sequences) and 11 SRP protein sequences (a total of 39 protein sequences from SRP9, SRP14, SRP19, SRP21, SRP54, SRP68 or SRP72). Also downloadable are sample SRP RNA secondary structure diagrams, a three-dimensional model of the human SRP RNA, search motifs and software.
摘要
信号识别颗粒数据库（SRPDB）提供了比对后的信号识别颗粒RNA（SRP RNA）和信号识别颗粒蛋白序列，并按系统发育顺序进行了排列和注释。此次发布增加了三条SRP RNA序列（SRP RNA序列总数达到96条）和11条SRP蛋白序列（来自SRP9、SRP14、SRP19、SRP21、SRP54、SRP68或SRP72的蛋白序列总数为39条）。还可下载信号识别颗粒RNA二级结构示意图样本、人类信号识别颗粒RNA的三维模型、搜索基序和软件。
相似文献
1
The Signal Recognition Particle Database (SRPDB).信号识别颗粒数据库（SRPDB）。
Nucleic Acids Res. 1997 Jan 1;25(1):107-8. doi: 10.1093/nar/25.1.107.
2
The Signal Recognition Particle Database (SRPDB).信号识别颗粒数据库（SRPDB）。
Nucleic Acids Res. 1998 Jan 1;26(1):177-8. doi: 10.1093/nar/26.1.177.
3
The signal recognition particle database (SRPDB).信号识别颗粒数据库（SRPDB）。
Nucleic Acids Res. 1994 Sep;22(17):3483-4. doi: 10.1093/nar/22.17.3483.
4
The Signal Recognition Particle Database (SRPDB).信号识别颗粒数据库（SRPDB）。
Nucleic Acids Res. 1996 Jan 1;24(1):80-1. doi: 10.1093/nar/24.1.80.
5
SRPDB (Signal Recognition Particle Database).信号识别颗粒数据库（SRPDB）
Nucleic Acids Res. 2001 Jan 1;29(1):169-70. doi: 10.1093/nar/29.1.169.
6
SRPDB: Signal Recognition Particle Database.SRPDB：信号识别颗粒数据库。
Nucleic Acids Res. 2003 Jan 1;31(1):363-4. doi: 10.1093/nar/gkg107.
7
SRPDB (signal recognition particle database).信号识别颗粒数据库（SRPDB）
Nucleic Acids Res. 2000 Jan 1;28(1):171-2. doi: 10.1093/nar/28.1.171.
8
The Signal Recognition Particle Database (SRPDB).信号识别颗粒数据库（SRPDB）。
Nucleic Acids Res. 1999 Jan 1;27(1):169-70. doi: 10.1093/nar/27.1.169.
9
The signal recognition particle database (SRPDB).信号识别颗粒数据库（SRPDB）。
Nucleic Acids Res. 1993 Jul 1;21(13):3019-20. doi: 10.1093/nar/21.13.3019.
10
The tmRDB and SRPDB resources.tmRDB和SRPDB资源。
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D163-8. doi: 10.1093/nar/gkj142.
引用本文的文献
1
Localization of signal recognition particle RNA in the nucleolus of mammalian cells.信号识别颗粒RNA在哺乳动物细胞核仁中的定位。
Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):7981-6. doi: 10.1073/pnas.95.14.7981.
2
Interaction of rice and human SRP19 polypeptides with signal recognition particle RNA.水稻和人类SRP19多肽与信号识别颗粒RNA的相互作用。
Plant Mol Biol. 1997 Jun;34(3):507-15. doi: 10.1023/a:1005834026743.
本文引用的文献
1
Comparative analysis of tertiary structure elements in signal recognition particle RNA.信号识别颗粒RNA三级结构元件的比较分析
Fold Des. 1996;1(4):315-24. doi: 10.1016/S1359-0278(96)00044-2.
2
Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.产甲烷古菌詹氏甲烷球菌的全基因组序列
Science. 1996 Aug 23;273(5278):1058-73. doi: 10.1126/science.273.5278.1058.
3
The Ribosomal Database Project (RDP).核糖体数据库项目（RDP）。
Nucleic Acids Res. 1996 Jan 1;24(1):82-5. doi: 10.1093/nar/24.1.82.
4
The European Bioinformatics Institute (EBI) databases.欧洲生物信息学研究所（EBI）数据库。
Nucleic Acids Res. 1996 Jan 1;24(1):6-12. doi: 10.1093/nar/24.1.6.
5
The PROSITE database, its status in 1995.PROSITE数据库及其1995年的状况。
Nucleic Acids Res. 1996 Jan 1;24(1):189-96. doi: 10.1093/nar/24.1.189.
6
GenBank.基因银行
Nucleic Acids Res. 1996 Jan 1;24(1):1-5. doi: 10.1093/nar/24.1.1.
7
Small cytoplasmic RNA (scRNA) gene from Clostridium perfringens can replace the gene for the Bacillus subtilis scRNA in both growth and sporulation.产气荚膜梭菌的小细胞质RNA（scRNA）基因在生长和孢子形成过程中均可替代枯草芽孢杆菌scRNA的基因。
Microbiology (Reading). 1995 Nov;141 ( Pt 11):2965-75. doi: 10.1099/13500872-141-11-2965.
8
Subunits of the Saccharomyces cerevisiae signal recognition particle required for its functional expression.酿酒酵母信号识别颗粒功能表达所需的亚基。
EMBO J. 1994 Sep 15;13(18):4390-400. doi: 10.1002/j.1460-2075.1994.tb06759.x.
9
Site-directed mutagenesis of signal-recognition particle RNA. Identification of the nucleotides in helix 8 required for interaction with protein SRP19.信号识别颗粒RNA的定点诱变。鉴定与蛋白质SRP19相互作用所需的8号螺旋中的核苷酸。
Eur J Biochem. 1994 Jun 15;222(3):885-90. doi: 10.1111/j.1432-1033.1994.tb18936.x.
10
Isolation and characterization of a cDNA clone encoding the 19 kDa protein of signal recognition particle (SRP): expression and binding to 7SL RNA.
Nucleic Acids Res. 1988 Oct 25;16(20):9431-42. doi: 10.1093/nar/16.20.9431.
Zotero 插件