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对来自嗜尸摇蚊的单体血红蛋白中玻尔效应结构基础的溶液核磁共振研究。

Solution NMR study of the structural basis of the Bohr effect in the monomeric hemoglobins from Chironomus thummi thummi.

作者信息

Zhang W, Gersonde K, La Mar G N

机构信息

Department of Chemistry, University of California, Davis 95616, USA.

出版信息

Biochemistry. 1997 Feb 18;36(7):1689-98. doi: 10.1021/bi9626463.

Abstract

The larva of the midge Chironomus thummi thummi possesses two monomeric hemoglobins. HbIII and HbIV, with extensive sequence homology, which exhibit marked but differential Bohr effects (pH influence on ligand affinity). These Hbs serve as ideal models for allosteric control of ligand affinity via tertiary-only structural changes. The cyanomet derivatives of these two Hbs have been shown to possess essentially indistinguishable heme cavity structures in solution at low pH (Zhang et al., 1996) that are also very similar to that of the low pH form of HbIII in the crystal (Steigemann & Weber, 1979). 2D 1H NMR has been utilized to elucidate the solution heme cavity structure of the alkaline form of the cyanomet derivatives of HbIII and HbIV to identify the Bohr proton binding site and characterize the nature of the structural changes that accompany the allosteric transition. Significant structural changes with pH have been identified in two regions of the heme cavity, near the axial His and at the junction of pyrroles B and C. The Bohr proton site is identified as His94, which at low pH makes a salt bridge to the terminal Met136. The rupture of this salt bridge at high pH leads to the expulsion of the Met136 side chain next to the His F8 ring where it serves as a spacer between the heme and F-helix, and leads to a cascade of side chain reorientations in the densely packed hydrophobic interior involving five Phe (65, 66, 128, 129, 133), Val132, and Ile69, all on the E- and H-helices. The terminal member of the cascade, Phe65, which acts as a spacer between the E- and F-helices at low pH, is rotated toward the heme plane. The conversion of the low pH, low-affinity "tense" to the high pH, high-affinity "relaxed" state is primarily due to the removal of the Met136 and Phe65 spacers. A central residue in transmitting the Bohr effect from His94 to Phe65 is residue 132. In HbIV, Val132 provides a cavity in the hydrophobic core to readily accommodate the initial step in rotating the Phe129 side chain. In HbIII, the Ile132 provides tight packing to all neighboring side chains and hence would inhibit the rotation of the Phe129 side chain. It is proposed that the lone internal residue difference between HbIII (Ile132) and HbIV (Val132) is the primary basis for the different amplitudes of their Bohr effect.

摘要

摇蚊(Chironomus thummi thummi)的幼虫拥有两种单体血红蛋白,即HbIII和HbIV,它们具有广泛的序列同源性,并表现出显著但不同的波尔效应(pH对配体亲和力的影响)。这些血红蛋白是通过仅三级结构变化对配体亲和力进行变构控制的理想模型。已证明这两种血红蛋白的氰化高铁衍生物在低pH值的溶液中具有基本无法区分的血红素腔结构(Zhang等人,1996年),这也与晶体中HbIII低pH形式的结构非常相似(Steigemann和Weber,1979年)。二维¹H NMR已被用于阐明HbIII和HbIV的氰化高铁衍生物碱性形式的溶液血红素腔结构,以确定波尔质子结合位点,并表征变构转变伴随的结构变化的性质。已确定在血红素腔的两个区域,靠近轴向组氨酸处以及吡咯B和C的连接处,随着pH值变化存在显著的结构变化。波尔质子位点被确定为His94,在低pH值时它与末端的Met136形成盐桥。在高pH值时,该盐桥的断裂导致Met136侧链从His F8环旁边排出,它在那里充当血红素和F - 螺旋之间的间隔物,并导致密集堆积的疏水内部中五个苯丙氨酸(65、66、128、129、133)、Val132和Ile69(均位于E - 和H - 螺旋上)的侧链重新定向。级联反应的末端成员Phe65,在低pH值时充当E - 和F - 螺旋之间的间隔物,此时朝着血红素平面旋转。低pH值、低亲和力的“紧张”状态向高pH值、高亲和力的“松弛”状态的转变主要是由于Met136和Phe65间隔物的去除。将波尔效应从His94传递到Phe65的一个中心残基是132位残基。在HbIV中,Val132在疏水核心中提供了一个空腔,以便轻松容纳Phe129侧链旋转的初始步骤。在HbIII中,Ile132为所有相邻侧链提供紧密堆积,因此会抑制Phe129侧链的旋转。有人提出,HbIII(Ile132)和HbIV(Val132)之间唯一的内部残基差异是它们波尔效应幅度不同的主要原因。

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