• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Direct phase determination in protein electron crystallography: the pseudo-atom approximation.蛋白质电子晶体学中的直接相位确定:伪原子近似法。
Proc Natl Acad Sci U S A. 1997 Mar 4;94(5):1791-4. doi: 10.1073/pnas.94.5.1791.
2
Direct structure analysis in protein electron crystallography: crystallographic phases for halorhodopsin to 6-A resolution.蛋白质电子晶体学中的直接结构分析:嗜盐菌视紫红质至6埃分辨率的晶体学相位
Proc Natl Acad Sci U S A. 1995 Oct 24;92(22):10074-8. doi: 10.1073/pnas.92.22.10074.
3
Projection structure of halorhodopsin from Halobacterium halobium at 6 A resolution obtained by electron cryo-microscopy.通过电子冷冻显微镜在6埃分辨率下获得的嗜盐嗜盐杆菌视紫红质的投影结构。
J Mol Biol. 1993 Dec 5;234(3):837-46. doi: 10.1006/jmbi.1993.1629.
4
The three-dimensional structure of halorhodopsin to 5 A by electron crystallography: A new unbending procedure for two-dimensional crystals by using a global reference structure.通过电子晶体学解析嗜盐视紫红质至5埃的三维结构:一种利用全局参考结构对二维晶体进行新的伸直处理方法。
Proc Natl Acad Sci U S A. 2000 Apr 25;97(9):4637-42. doi: 10.1073/pnas.080064697.
5
Symbolic addition in protein electron crystallography--a method for finding projected helices.蛋白质电子晶体学中的符号加法——一种寻找投影螺旋的方法。
Acta Crystallogr A. 1998 May 1;54 ( Pt 3):290-5. doi: 10.1107/s0108767397016905.
6
The pseudo-atom approach to phase determination in protein electron crystallography--noncentrosymmetric projections.蛋白质电子晶体学中相位确定的伪原子方法——非中心对称投影
Acta Crystallogr A. 1997 Jul 1;53 ( Pt 4):445-55. doi: 10.1107/s0108767397003280.
7
Electron crystallographic analysis of two-dimensional crystals of sensory rhodopsin II: a 6.9 A projection structure.感官视紫红质II二维晶体的电子晶体学分析:6.9埃投影结构
J Mol Biol. 2001 Apr 27;308(2):279-93. doi: 10.1006/jmbi.2001.4565.
8
Three-dimensional structure of halorhodopsin at 7 A resolution.盐视紫红质在7埃分辨率下的三维结构。
J Mol Biol. 1995 Apr 7;247(4):726-38. doi: 10.1006/jmbi.1995.0176.
9
Direct structure determination by electron crystallography: protein data sets.
Micron. 1995;26(6):511-20. doi: 10.1016/0968-4328(95)00003-8.
10
Structure of Halorhodopsin from Halobacterium salinarum in a new crystal form that imposes little restraint on the E-F loop.来自盐沼盐杆菌的嗜盐视紫红质以一种对E-F环几乎没有限制的新晶体形式存在的结构。
J Struct Biol. 2015 Jun;190(3):373-8. doi: 10.1016/j.jsb.2015.04.010. Epub 2015 Apr 24.

引用本文的文献

1
Putting structure into context: fitting of atomic models into electron microscopic and electron tomographic reconstructions.将结构置于上下文中:将原子模型拟合到电子显微镜和电子断层重建中。
Curr Opin Cell Biol. 2012 Feb;24(1):141-7. doi: 10.1016/j.ceb.2011.11.002. Epub 2011 Dec 5.
2
On the direct determination of three-dimensional crystallographic phases at low resolution: crambin at 6 A.关于低分辨率下三维晶体学相位的直接测定:6埃分辨率下的胰凝乳蛋白酶抑制剂
Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):3982-6. doi: 10.1073/pnas.060019197.

本文引用的文献

1
On the ab initio solution of the phase problem for macromolecules at very low resolution: the few atoms model method.关于极低分辨率下大分子相位问题的从头算解决方案:少数原子模型方法。
Acta Crystallogr D Biol Crystallogr. 1995 Nov 1;51(Pt 6):896-903. doi: 10.1107/S0907444995005075.
2
DETERMINATION OF THE KAPPA-HELIX CONFIGURATION OF POLY-GAMMA-BENZYL-L-GLUTAMATE BY ELECTRON DIFFRACTION.用电子衍射法测定聚γ-苄基-L-谷氨酸的κ-螺旋构型
J Mol Biol. 1964 Dec;10:530-3. doi: 10.1016/s0022-2836(64)80071-1.
3
Direct methods in protein electron crystallography: the ab initio structure determination of two membrane protein structures in projection using maximum entropy and likelihood.蛋白质电子晶体学中的直接方法:利用最大熵和似然性对两个膜蛋白结构投影进行从头结构测定。
Acta Crystallogr A. 1996 Nov 1;52 ( Pt 6):937-46. doi: 10.1107/s0108767396008744.
4
Direct structure determination by electron crystallography: protein data sets.
Micron. 1995;26(6):511-20. doi: 10.1016/0968-4328(95)00003-8.
5
Direct phasing in protein electron crystallography--phase extension and the prospects for ab initio determinations.蛋白质电子晶体学中的直接相位法——相位扩展及从头计算的前景
Acta Crystallogr A. 1996 May 1;52 ( Pt 3):480-9. doi: 10.1107/s0108767396001420.
6
Projection structure of halorhodopsin from Halobacterium halobium at 6 A resolution obtained by electron cryo-microscopy.通过电子冷冻显微镜在6埃分辨率下获得的嗜盐嗜盐杆菌视紫红质的投影结构。
J Mol Biol. 1993 Dec 5;234(3):837-46. doi: 10.1006/jmbi.1993.1629.
7
The Sayre equation in electron crystallography.电子晶体学中的塞尔方程。
Ultramicroscopy. 1995 Jan;57(1):59-89. doi: 10.1016/0304-3991(94)00161-f.
8
Use of globic scattering factors for protein structures at low resolution.
Acta Crystallogr A. 1995 Nov 1;51 ( Pt 6):945-7. doi: 10.1107/s0108767395010038.
9
Direct structure analysis in protein electron crystallography: crystallographic phases for halorhodopsin to 6-A resolution.蛋白质电子晶体学中的直接结构分析:嗜盐菌视紫红质至6埃分辨率的晶体学相位
Proc Natl Acad Sci U S A. 1995 Oct 24;92(22):10074-8. doi: 10.1073/pnas.92.22.10074.
10
Structural comparison of native and deoxycholate-treated purple membrane.天然和脱氧胆酸盐处理的紫膜的结构比较。
Biophys J. 1985 Nov;48(5):775-80. doi: 10.1016/S0006-3495(85)83835-2.

蛋白质电子晶体学中的直接相位确定:伪原子近似法。

Direct phase determination in protein electron crystallography: the pseudo-atom approximation.

作者信息

Dorset D L

机构信息

Electron Diffraction Department, Hauptman-Woodward Medical Research Institute, Inc., Buffalo, NY 14203-1196, USA.

出版信息

Proc Natl Acad Sci U S A. 1997 Mar 4;94(5):1791-4. doi: 10.1073/pnas.94.5.1791.

DOI:10.1073/pnas.94.5.1791
PMID:9050857
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC19995/
Abstract

The crystal structure of halorhodopsin is determined directly in its centrosymmetric projection using 6.0-A-resolution electron diffraction intensities, without including any previous phase information from the Fourier transform of electron micrographs. The potential distribution in the projection is assumed a priori to be an assembly of globular densities. By an appropriate dimensional re-scaling, these "globs" are then assumed to be pseudo-atoms for normalization of the observed structure factors. After this treatment, the structure is determined directly by conventional direct methods, followed by Fourier refinement, leading to a mean phase deviation of only 20 degrees (from the values originally found from the image transform) for the 45 most intense reflections.

摘要

利用6.0埃分辨率的电子衍射强度,直接在其中心对称投影中确定了嗜盐视紫红质的晶体结构,而不包括来自电子显微镜傅里叶变换的任何先前相位信息。投影中的电位分布先验地假定为球状密度的集合。通过适当的尺寸重新缩放,这些“球”然后被假定为伪原子,用于对观察到的结构因子进行归一化。经过这种处理后,通过传统的直接法直接确定结构,然后进行傅里叶精修,对于45个最强反射,平均相位偏差仅为20度(相对于最初从图像变换中得到的值)。