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一种用于腺病毒载体生产的依赖辅助病毒系统有助于确定高效DNA包装的下限。

A helper-dependent system for adenovirus vector production helps define a lower limit for efficient DNA packaging.

作者信息

Parks R J, Graham F L

机构信息

Department of Biology, McMaster University, Hamilton, Ontario, Canada.

出版信息

J Virol. 1997 Apr;71(4):3293-8. doi: 10.1128/JVI.71.4.3293-3298.1997.

DOI:10.1128/JVI.71.4.3293-3298.1997
PMID:9060698
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC191467/
Abstract

Adenoviruses (Ads) are intermediate-sized mammalian DNA viruses with a double-stranded linear genome of 36 kb. The icosohedral virion has been shown to accommodate up to 105% of the wild-type genome length, and genomes larger than this size are either unpackageable or extremely unstable, frequently undergoing DNA rearrangement. Here we show that the Ad virion also has a lower packaging limit of approximately 75% of the wild-type genome length. We have constructed a series of vectors with sizes ranging from 15.1 to 33.6 kb and used these to show that in our Cre/loxP helper-dependent system (R. J. Parks, L. Chen, M. Anton, U. Sankar, M. A. Rudnicki, and F. L. Graham, Proc. Natl. Acad. Sci. USA 93:13565-13570, 1996), vectors with genomes greater than or equal to 27.7 kb are packaged with equal efficiencies, whereas vectors with smaller genomes are inefficiently packaged. A 15.1-kb vector, approximately half the size of the wild-type adenovirus genome, was packaged with an efficiency intermediate between that of the small (21.3- to 25.7-kb) and large (27.7- to 33.5-kb) vectors. Analysis of vector DNA after amplification in helper virus-infected cells showed that vectors below 75% of the Ad genome had undergone DNA rearrangements, whereas larger vectors were unaltered. The 15.1-kb vector was recovered primarily as a mix of head-to-tail and tail-to-tail covalent dimers, with a size of 30 kb. We conclude that the Ad virion can efficiently accommodate viral DNA of greater than 75% of the viral genome but that smaller viral genomes tend to undergo rearrangement, resulting in a final size of greater than approximately 27 kb before they can be efficiently packaged. Knowledge of the lower limit to Ad DNA packaging should allow for the design of better and more stable vectors.

摘要

腺病毒(Ads)是中等大小的哺乳动物DNA病毒,具有36 kb的双链线性基因组。已证明二十面体病毒粒子能够容纳高达野生型基因组长度105%的DNA,大于此大小的基因组要么无法包装,要么极其不稳定,经常发生DNA重排。在此我们表明,腺病毒病毒粒子的包装下限约为野生型基因组长度的75%。我们构建了一系列大小在15.1至33.6 kb之间的载体,并利用这些载体表明,在我们的Cre/loxP辅助依赖系统(R. J. Parks、L. Chen、M. Anton、U. Sankar、M. A. Rudnicki和F. L. Graham,《美国国家科学院院刊》93:13565 - 13570,1996年)中,基因组大于或等于27.7 kb的载体包装效率相同,而基因组较小的载体包装效率低下。一个15.1 kb的载体,大约是野生型腺病毒基因组大小的一半,其包装效率介于小载体(21.3至25.7 kb)和大载体(27.7至33.5 kb)之间。对在辅助病毒感染细胞中扩增后的载体DNA进行分析表明,小于腺病毒基因组75%的载体发生了DNA重排,而较大的载体未发生改变。15.1 kb的载体主要以头对头和尾对尾共价二聚体的混合物形式回收,大小为30 kb。我们得出结论,腺病毒病毒粒子能够有效容纳大于病毒基因组75%的病毒DNA,但较小的病毒基因组往往会发生重排,在能够有效包装之前最终大小大于约27 kb。了解腺病毒DNA包装的下限应有助于设计出更好、更稳定的载体。

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本文引用的文献

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A helper-dependent adenovirus vector system: removal of helper virus by Cre-mediated excision of the viral packaging signal.一种依赖辅助病毒的腺病毒载体系统:通过Cre介导切除病毒包装信号来去除辅助病毒
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