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癌细胞改变的分子细胞遗传学特征

Molecular cytogenetic characterization of cancer cell alterations.

作者信息

Popescu N C, Zimonjic D B

机构信息

Molecular Cytogenetics Section, National Cancer Institute, Bethesda, Maryland 20892, USA.

出版信息

Cancer Genet Cytogenet. 1997 Jan;93(1):10-21. doi: 10.1016/s0165-4608(96)00262-2.

DOI:10.1016/s0165-4608(96)00262-2
PMID:9062575
Abstract

Chromosomal abnormalities are the hallmark of cancer cells. Recurring and highly consistent structural and numerical alterations have been identified in a large number of leukemias, lymphomas, and solid tumors. The identification of recurrent genetic alterations and the isolation of molecular markers have clinical applications in the diagnosis and prognosis of neoplasia and in the detection of minimal residual disease that are essential for designing the most effective therapeutic approach. Polymerase chain reaction (PCR) and fluorescence in situ hybridization (FISH) are powerful techniques for detection of genomic alterations. The battery of FISH methods and DNA probes that are available can resolve virtually any chromosomal alterations regardless of their complexity. Combined chromosome banding, multifluor or spectral karyotype, and comparative genomic hybridization (CGH) allow identification of structural and numerical alterations on a global basis, mapping of the DNA copy number on the entire tumor genome, complete derivation of complex rearrangements, and localization of the breakpoints of translocations and deletions. Regions of recurrent alterations can be microdisected, amplified, microclone libraries constructed and probes localized on extended chromosomes or chromatin fibers for construction of high resolution physical maps that are critical for positional cloning and gene identification. In this review we attempted to cover the current trends in cancer molecular cytogenetics, and to outline the importance of molecular chromosome analysis in the understanding of oncogenesis and its clinical applications.

摘要

染色体异常是癌细胞的标志。在大量白血病、淋巴瘤和实体瘤中已发现反复出现且高度一致的结构和数量改变。复发性基因改变的鉴定以及分子标志物的分离在肿瘤的诊断和预后以及微小残留病的检测中具有临床应用价值,而这些对于设计最有效的治疗方法至关重要。聚合酶链反应(PCR)和荧光原位杂交(FISH)是检测基因组改变的强大技术。现有的一系列FISH方法和DNA探针几乎可以解析任何染色体改变,无论其复杂性如何。联合染色体显带、多荧光或光谱核型分析以及比较基因组杂交(CGH)能够在整体水平上鉴定结构和数量改变,绘制整个肿瘤基因组上的DNA拷贝数图谱,完整推导复杂重排以及定位易位和缺失的断点。可以对反复出现改变的区域进行显微切割、扩增,构建微克隆文库,并将探针定位在延伸的染色体或染色质纤维上,以构建高分辨率物理图谱,这对于定位克隆和基因鉴定至关重要。在本综述中,我们试图涵盖癌症分子细胞遗传学的当前趋势,并概述分子染色体分析在理解肿瘤发生及其临床应用中的重要性。

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Molecular cytogenetic characterization of cancer cell alterations.癌细胞改变的分子细胞遗传学特征
Cancer Genet Cytogenet. 1997 Jan;93(1):10-21. doi: 10.1016/s0165-4608(96)00262-2.
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Molecular cytogenetic applications in analysis of the cancer genome.分子细胞遗传学在癌症基因组分析中的应用。
Methods Mol Biol. 2007;383:165-85. doi: 10.1007/978-1-59745-335-6_11.
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Multiple recurrent chromosomal breakpoints in mantle cell lymphoma revealed by a combination of molecular cytogenetic techniques.联合分子细胞遗传学技术揭示套细胞淋巴瘤中的多个复发性染色体断点
Genes Chromosomes Cancer. 2008 Dec;47(12):1086-97. doi: 10.1002/gcc.20609.
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Rapid high-resolution mapping of balanced chromosomal rearrangements on tiling CGH arrays.利用平铺 CGH 阵列快速高分辨率映射平衡染色体重排。
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Combined spectral karyotyping, comparative genomic hybridization, and in vitro apoptyping of a panel of Burkitt's lymphoma-derived B cell lines reveals an unexpected complexity of chromosomal aberrations and a recurrence of specific abnormalities in chemoresistant cell lines.对一组伯基特淋巴瘤来源的B细胞系进行联合光谱核型分析、比较基因组杂交和体外凋亡分析,揭示了染色体畸变的意外复杂性以及化疗耐药细胞系中特定异常的复发情况。
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Efficacy of current molecular cytogenetic protocols for the diagnosis of chromosome aberrations in tumor specimens.当前分子细胞遗传学方案在肿瘤标本染色体畸变诊断中的效能
Cytokines Mol Ther. 1996 Sep;2(3):163-9.
10
[Multicolor fluorescence in situ hybridization (mFISH].[多色荧光原位杂交(mFISH)]
Cas Lek Cesk. 2001 Mar 1;140(4):99-103.

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Concurrent analysis of loss of heterozygosity (LOH) and copy number abnormality (CNA) for oral premalignancy progression using the Affymetrix 10K SNP mapping array.使用Affymetrix 10K SNP基因分型芯片对口腔癌前病变进展过程中的杂合性缺失(LOH)和拷贝数异常(CNA)进行同步分析。
Hum Genet. 2004 Sep;115(4):327-30. doi: 10.1007/s00439-004-1163-1.
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Detection of DNA copy number abnormality by microarray expression analysis.
通过微阵列表达分析检测DNA拷贝数异常。
Hum Genet. 2004 Apr;114(5):464-7. doi: 10.1007/s00439-004-1087-9. Epub 2004 Feb 11.
4
Comprehensive genetic analysis of cancer cells.癌细胞的综合基因分析。
J Cell Mol Med. 2000 Jul-Sep;4(3):151-163. doi: 10.1111/j.1582-4934.2000.tb00113.x.
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Texture analysis of fluorescence lifetime images of AT- and GC-rich regions in nuclei.细胞核中富含AT和GC区域的荧光寿命图像的纹理分析。
J Histochem Cytochem. 2001 Nov;49(11):1443-51. doi: 10.1177/002215540104901112.
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Texture analysis of fluorescence lifetime images of nuclear DNA with effect of fluorescence resonance energy transfer.具有荧光共振能量转移效应的细胞核DNA荧光寿命图像的纹理分析
Cytometry. 2001 Feb 1;43(2):94-100. doi: 10.1002/1097-0320(20010201)43:2<94::aid-cyto1023>3.0.co;2-4.
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Diverse karyotypic abnormalities of the c-myc locus associated with c-myc dysregulation and tumor progression in multiple myeloma.与多发性骨髓瘤中c-myc失调及肿瘤进展相关的c-myc基因座的多种核型异常。
Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):228-33. doi: 10.1073/pnas.97.1.228.