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全分子证据支持的鲸鱼新系统发育学。

Novel phylogeny of whales supported by total molecular evidence.

作者信息

Hasegawa M, Adachi J, Milinkovitch M C

机构信息

Institute of Statistical Mathematics, Tokyo, Japan.

出版信息

J Mol Evol. 1997;44 Suppl 1:S117-20. doi: 10.1007/pl00000062.

DOI:10.1007/pl00000062
PMID:9071019
Abstract

Given that the analysis of a single gene does not necessarily provide unambiguous phylogenetic information, it is important to scrutinize as many genes as possible. Using the maximum likelihood method, particularly suitable for a total evidence approach, we evaluated the phylogenetic information provided by the 12S and 16S rRNA, cytochrome b, and myoglobin sequence data in order to resolve one of the most debated phylogenetic questions: the relationships among the major groups of cetaceans. Our analysis strongly supports the hypothesis that sperm whales are closer to baleen whales than to dolphins.

摘要

鉴于对单个基因的分析不一定能提供明确的系统发育信息,尽可能多地审查基因是很重要的。使用特别适用于全证据方法的最大似然法,我们评估了12S和16S rRNA、细胞色素b和肌红蛋白序列数据所提供的系统发育信息,以解决最具争议的系统发育问题之一:鲸类主要类群之间的关系。我们的分析有力地支持了一个假说,即抹香鲸与须鲸的亲缘关系比与海豚更近。

相似文献

1
Novel phylogeny of whales supported by total molecular evidence.全分子证据支持的鲸鱼新系统发育学。
J Mol Evol. 1997;44 Suppl 1:S117-20. doi: 10.1007/pl00000062.
2
Relationship of baleen whales established by cytochrome b gene sequence comparison.通过细胞色素b基因序列比较确定的须鲸之间的关系。
Nature. 1994 Feb 24;367(6465):726-8. doi: 10.1038/367726a0.
3
Revised phylogeny of whales suggested by mitochondrial ribosomal DNA sequences.线粒体核糖体DNA序列揭示的鲸类修订系统发育树
Nature. 1993 Jan 28;361(6410):346-8. doi: 10.1038/361346a0.
4
Phylogeny of all major groups of cetaceans based on DNA sequences from three mitochondrial genes.基于三个线粒体基因的DNA序列构建的所有主要鲸类动物类群的系统发育。
Mol Biol Evol. 1994 Nov;11(6):939-48. doi: 10.1093/oxfordjournals.molbev.a040164.
5
Cytochrome b nucleotide sequences and the identification of five primary lineages of extant cetaceans.细胞色素b核苷酸序列与现存鲸类五种主要谱系的鉴定
Mol Biol Evol. 1996 Feb;13(2):407-17. doi: 10.1093/oxfordjournals.molbev.a025599.
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Phylogenetic relationships of artiodactyls and cetaceans as deduced from the comparison of cytochrome b and 12S rRNA mitochondrial sequences.基于细胞色素b和12S rRNA线粒体序列比较推导的偶蹄目动物与鲸目动物的系统发育关系。
Mol Biol Evol. 1997 May;14(5):550-9. doi: 10.1093/oxfordjournals.molbev.a025792.
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The vestigial olfactory receptor subgenome of odontocete whales: phylogenetic congruence between gene-tree reconciliation and supermatrix methods.齿鲸遗留嗅觉受体亚基因组:基因树和解与超级矩阵方法的系统发育一致性。
Syst Biol. 2008 Aug;57(4):574-90. doi: 10.1080/10635150802304787.
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Molecular phylogenetic relationships of pond frogs distributed in the Palearctic region inferred from DNA sequences of mitochondrial 12S ribosomal RNA and cytochrome b genes.基于线粒体12S核糖体RNA和细胞色素b基因的DNA序列推断古北界分布的池蛙的分子系统发育关系。
Mol Phylogenet Evol. 2000 Aug;16(2):278-85. doi: 10.1006/mpev.2000.0791.
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cDNA-derived amino acid sequences of myoglobins from nine species of whales and dolphins.9种鲸类和海豚类动物肌红蛋白的cDNA推导氨基酸序列。
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Phylogenetic position of cetaceans relative to artiodactyls: reanalysis of mitochondrial and nuclear sequences.鲸类相对于偶蹄目的系统发育位置:线粒体和核序列的重新分析
Mol Biol Evol. 1996 May;13(5):710-7. doi: 10.1093/oxfordjournals.molbev.a025632.

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本文引用的文献

1
Molecular phylogeny of cetaceans prompts revision of morphological transformations.鲸类分子系统发育促使形态转变的修订。
Trends Ecol Evol. 1995 Aug;10(8):328-34. doi: 10.1016/s0169-5347(00)89120-x.
2
Phylogenetic position of cetaceans relative to artiodactyls: reanalysis of mitochondrial and nuclear sequences.鲸类相对于偶蹄目的系统发育位置:线粒体和核序列的重新分析
Mol Biol Evol. 1996 May;13(5):710-7. doi: 10.1093/oxfordjournals.molbev.a025632.
3
Model of amino acid substitution in proteins encoded by mitochondrial DNA.线粒体DNA编码蛋白质中氨基酸替代的模型。
J Mol Evol. 1996 Apr;42(4):459-68. doi: 10.1007/BF02498640.
4
Cytochrome b nucleotide sequences and the identification of five primary lineages of extant cetaceans.细胞色素b核苷酸序列与现存鲸类五种主要谱系的鉴定
Mol Biol Evol. 1996 Feb;13(2):407-17. doi: 10.1093/oxfordjournals.molbev.a025599.
5
Origin of underwater hearing in whales.鲸鱼水下听觉的起源。
Nature. 1993 Feb 4;361(6411):444-5. doi: 10.1038/361444a0.
6
Revised phylogeny of whales suggested by mitochondrial ribosomal DNA sequences.线粒体核糖体DNA序列揭示的鲸类修订系统发育树
Nature. 1993 Jan 28;361(6410):346-8. doi: 10.1038/361346a0.
7
Relationship of baleen whales established by cytochrome b gene sequence comparison.通过细胞色素b基因序列比较确定的须鲸之间的关系。
Nature. 1994 Feb 24;367(6465):726-8. doi: 10.1038/367726a0.
8
Phylogeny of whales: dependence of the inference on species sampling.鲸类的系统发育:推断对物种采样的依赖性。
Mol Biol Evol. 1995 Jan;12(1):177-9. doi: 10.1093/oxfordjournals.molbev.a040187.
9
Phylogeny of all major groups of cetaceans based on DNA sequences from three mitochondrial genes.基于三个线粒体基因的DNA序列构建的所有主要鲸类动物类群的系统发育。
Mol Biol Evol. 1994 Nov;11(6):939-48. doi: 10.1093/oxfordjournals.molbev.a040164.
10
Novel phylogeny of whales revisited but not revised.
Mol Biol Evol. 1995 May;12(3):518-20. doi: 10.1093/oxfordjournals.molbev.a040226.