Kim J, Ashworth L, Branscomb E, Stubbs L
Biology Division, Oak Ridge National Laboratory, Tennessee 37831-8077, USA.
Genome Res. 1997 May;7(5):532-40. doi: 10.1101/gr.7.5.532.
Peg3 (paternally expressed gene 3) is the first imprinted gene detected in the proximal region of mouse chromosome 7. Because imprinting is a trait that is generally conserved among mammals, and imprinted domains generally encompass several adjacent genes, expression patterns and chromosomal environment of the human counterpart of Peg3 are of special interest. In this study we have localized human PEG3 approximately 2 Mb proximal of the telomere of chromosome 19q, within a region known to carry large numbers of tandemly clustered Krüppel-type zinc finger-containing (ZNF) genes. Peg3 also encodes a Krüppel-type ZNF protein but one that is distinguished from other ZNF gene products by the fact that it carries two novel proline-rich motifs. Comparison between mouse Peg3 and partial human PEG3 gene sequences revealed a high level of conservation between the two species, despite the fact that one of the two proline-rich repeats is absent from the human gene. Our data demonstrate that the human gene is expressed at highest levels in ovary and placenta; mouse Peg3, by contrast, is transcribed at highest levels in the adult brain. These comparative mapping, sequencing, and expression data provide the first clues to the potential activities of PEG3, and generate new tools to aid in the analysis of structure and function of a potentially new imprinted domain located in human chromosome 19q13.4 and mouse chromosome 7.
Peg3(父系表达基因3)是在小鼠7号染色体近端区域检测到的第一个印记基因。由于印记是一种在哺乳动物中普遍保守的特性,并且印记区域通常包含几个相邻的基因,因此Peg3人类对应物的表达模式和染色体环境特别令人感兴趣。在本研究中,我们将人类PEG3定位在19号染色体长臂(q)端粒近端约2 Mb处,该区域已知携带大量串联聚集的含Krüppel型锌指(ZNF)基因。Peg3还编码一种Krüppel型ZNF蛋白,但该蛋白与其他ZNF基因产物的区别在于它带有两个新的富含脯氨酸的基序。小鼠Peg3和部分人类PEG3基因序列的比较显示,尽管人类基因中缺少两个富含脯氨酸重复序列中的一个,但这两个物种之间仍有高度的保守性。我们的数据表明,人类基因在卵巢和胎盘中表达水平最高;相比之下,小鼠Peg3在成年大脑中转录水平最高。这些比较定位、测序和表达数据为PEG3的潜在活性提供了首批线索,并产生了新的工具,以帮助分析位于人类19号染色体q13.4和小鼠7号染色体上一个潜在新的印记区域的结构和功能。