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比较基因组杂交分析中未抑制的散布重复序列干扰效应的自动校正

Automatic correction of the interfering effect of unsuppressed interspersed repetitive sequences in comparative genomic hybridization analysis.

作者信息

Kirchhoff M, Gerdes T, Maahr J, Rose H, Lundsteen C

机构信息

Chromosome Laboratory, Juliane Marie Center Rigshospitalet, University of Copenhagen, Denmark.

出版信息

Cytometry. 1997 Jun 1;28(2):130-4.

PMID:9181302
Abstract

Comparative genomic hybridization (CGH) is a relatively new technique whose application is increasing. The method has mostly been employed for detection of chromosome aberrations in cancers, and a large amount of data in this field is accumulating. At the same time, efforts are made to improve the technique in order to increase the sensitivity and the generation of reliable results. Based on experimental data, we have developed a computer algorithm for eliminating some of the interfering effects of unsuppressed repetitive sequences in CGH analysis, and thereby improved our CGH analysis system.

摘要

比较基因组杂交(CGH)是一种应用日益广泛的相对较新的技术。该方法主要用于检测癌症中的染色体畸变,并且该领域的大量数据正在积累。与此同时,人们正在努力改进该技术,以提高灵敏度并产生可靠的结果。基于实验数据,我们开发了一种计算机算法,用于消除CGH分析中未抑制的重复序列的一些干扰效应,从而改进了我们的CGH分析系统。

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Automatic correction of the interfering effect of unsuppressed interspersed repetitive sequences in comparative genomic hybridization analysis.比较基因组杂交分析中未抑制的散布重复序列干扰效应的自动校正
Cytometry. 1997 Jun 1;28(2):130-4.
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Detection of chromosomal gains and losses in comparative genomic hybridization analysis based on standard reference intervals.基于标准参考区间的比较基因组杂交分析中染色体增减的检测。
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High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays.使用比较基因组杂交微阵列对DNA拷贝数变异进行高分辨率分析。
Nat Genet. 1998 Oct;20(2):207-11. doi: 10.1038/2524.
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Automatic detection of stable and unstable chromosome aberrations visualized by three-color imaging after fluorescence in situ hybridization with a painting and a pancentromeric DNA probe.
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Comparison of fluorescein isothiocyanate- and Texas red-conjugated nucleotides for direct labeling in comparative genomic hybridization.用于比较基因组杂交中直接标记的异硫氰酸荧光素和德克萨斯红缀合核苷酸的比较
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Computer image analysis of comparative genomic hybridization.比较基因组杂交的计算机图像分析
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Whole-comparative genomic hybridization in domestic sheep (Ovis aries) breeds.家羊(绵羊)品种的全基因组比较杂交
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Comparison of comparative genomic hybridization with conventional karyotype and classical fluorescence in situ hybridization for prenatal and postnatal diagnosis of unbalanced chromosome abnormalities.比较基因组杂交与传统核型分析及经典荧光原位杂交在产前和产后不平衡染色体异常诊断中的应用比较
Ann Genet. 1998;41(3):133-40.
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Supernumerary ring chromosome in a Bednar tumor (pigmented dermatofibrosarcoma protuberans) is composed of interspersed sequences from chromosomes 17 and 22: a fluorescence in situ hybridization and comparative genomic hybridization analysis.贝德纳瘤(色素性隆突性皮肤纤维肉瘤)中的额外环状染色体由17号和22号染色体的散布序列组成:荧光原位杂交和比较基因组杂交分析
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High resolution comparative genomic hybridisation in clinical cytogenetics.临床细胞遗传学中的高分辨率比较基因组杂交
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