Schliebs W, Thanki N, Jaenicke R, Wierenga R K
EMBL, Heidelberg, Germany.
Biochemistry. 1997 Aug 12;36(32):9655-62. doi: 10.1021/bi963086a.
Triosephosphate isomerase (TIM) is a very stable dimer. In order to understand better the importance of dimerization for stability and catalytic activity, we have constructed a monomeric double-mutation variant. The dimer interface residues Thr75 and Gly76, which are at the tip of loop 3, have been substituted by an arginine and a glutamate, respectively. In wild type TIM, these two residues are at a distance of 27 A from the active site (as measured within the same subunit). This new variant, RE-TIM, was expressed in Escherichia coli, purified to homogeneity, and biochemically characterized. Sedimentation equilibrium ultracentrifugation runs showed that RE-TIM is a monomer in solution. Far-UV CD spectra indicate that this new variant is folded properly and that the secondary structure contents of RE-TIM are similar to those of wild type TIM. The monomeric RE-TIM has residual TIM activity. The thermal stability of RE-TIM is lower than that for wild type TIM. CD melting curves for RE-TIM and wild type TIM show Tm values of 52 and 57 degrees C, respectively, in the presence of the active site ligand 2-phosphoglycolate at 1 mM. Previously, we have characterized two other monomeric forms of TIM: monoTIM and H47N-TIM. The properties of RE-TIM, H47N-TIM, and monoTIM are compared, and it is argued that the properties of RE-TIM will be very similar to those of wild type monomeric subunits. This implies that wild type monomeric subunits have some stability and are catalytically active. It is also inferred that these monomeric subunits have flexible loops which rigidify at the dimer interface on dimerization, causing a 1000-fold increase of kcat and a 10-fold decrease of Km.
磷酸丙糖异构酶(TIM)是一种非常稳定的二聚体。为了更好地理解二聚化对稳定性和催化活性的重要性,我们构建了一种单体双突变变体。位于环3末端的二聚体界面残基Thr75和Gly76分别被精氨酸和谷氨酸取代。在野生型TIM中,这两个残基与活性位点的距离为27埃(在同一亚基内测量)。这种新变体RE-TIM在大肠杆菌中表达,纯化至同质,并进行了生化表征。沉降平衡超速离心实验表明,RE-TIM在溶液中是单体。远紫外圆二色光谱表明,这种新变体折叠正确,并且RE-TIM的二级结构含量与野生型TIM相似。单体RE-TIM具有残余的TIM活性。RE-TIM的热稳定性低于野生型TIM。在1 mM活性位点配体2-磷酸乙醇酸存在下,RE-TIM和野生型TIM的CD熔解曲线分别显示Tm值为52和57摄氏度。此前,我们已经表征了TIM的另外两种单体形式:单TIM和H47N-TIM。比较了RE-TIM、H47N-TIM和单TIM的性质,并认为RE-TIM的性质将与野生型单体亚基的性质非常相似。这意味着野生型单体亚基具有一定的稳定性并且具有催化活性。还推断这些单体亚基具有柔性环,在二聚化时在二聚体界面处刚性化,导致kcat增加1000倍,Km降低10倍。