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使用肠杆菌重复基因间共有序列(ERIC)引物进行的重复元件聚合酶链反应指纹图谱分析(rep-PCR)并不一定针对ERIC元件。

Repetitive element PCR fingerprinting (rep-PCR) using enterobacterial repetitive intergenic consensus (ERIC) primers is not necessarily directed at ERIC elements.

作者信息

Gillings M, Holley M

机构信息

Key Centre for Biodiversity and Bioresources, School of Biological Sciences, Macquarie University, Sydney, NSW, Australia.

出版信息

Lett Appl Microbiol. 1997 Jul;25(1):17-21. doi: 10.1046/j.1472-765x.1997.00162.x.

DOI:10.1046/j.1472-765x.1997.00162.x
PMID:9248074
Abstract

We examined the use of enterobacterial repetitive intergenic consensus (ERIC) sequences in PCR on the DNAs of various bacteria, bacteriophage, invertebrates, fungi, plants and vertebrates and have shown that complex ERIC-PCR patterns can be readily produced from all of these target organisms. A range of annealing temperatures was tested, from 52 degrees C (the commonly used annealing temperature) to 66 degrees C (the approximate Tm of ERIC primers). At the higher temperatures, most bands failed to amplify, the exception being a subset of bands from enterobacterial targets. It was concluded that ERIC-PCR does not necessarily direct amplification from genuine ERIC sequences.

摘要

我们检测了肠杆菌基因间重复一致序列(ERIC)在各种细菌、噬菌体、无脊椎动物、真菌、植物和脊椎动物DNA的PCR中的应用,结果表明,所有这些目标生物均能轻易产生复杂的ERIC-PCR图谱。我们测试了一系列退火温度,从52℃(常用的退火温度)到66℃(ERIC引物的近似熔解温度)。在较高温度下,大多数条带未能扩增,例外的是来自肠道细菌目标的一部分条带。由此得出结论,ERIC-PCR不一定直接从真正的ERIC序列进行扩增。

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