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大肠杆菌天冬氨酸转氨甲酰酶及其催化亚基中功能相关的水合变化。

Functionally linked hydration changes in Escherichia coli aspartate transcarbamylase and its catalytic subunit.

作者信息

LiCata V J, Allewell N M

机构信息

Department of Biochemistry, University of Minnesota, 1479 Gortner Avenue, St. Paul, Minnesota 55108, USA.

出版信息

Biochemistry. 1997 Aug 19;36(33):10161-7. doi: 10.1021/bi970669r.

Abstract

Aspartate transcarbamylase (ATCase) is a highly regulated, dodecameric enzyme that catalyzes the first committed step in pyrimidine biosynthesis. Upon ligation, ATCase undergoes a conformational transition from a low-activity T-state to a high-activity R-state. This transition involves major changes in the molecular architecture, including structural rearrangements of several intersubunit interfaces and a 12 A expansion of the molecule along its 3-fold axis. Solute-induced osmotic stress experiments report that approximately 208 solvent waters are taken up by ATCase as it binds substrate. Solvent-accessible surface area calculations conducted on the T and R conformers of ATCase agree very well with this result, predicting that approximately 189 waters are taken up during this conformational change. Both osmotic stress measurements and surface area calculations on the catalytic trimer of ATCase predict water release upon ligation of the trimer. Specific aspects of the application of osmotic stress to ATCase are also discussed, including solute size effects, and an assessment of potential alternative explanations for these results.

摘要

天冬氨酸转氨甲酰酶(ATCase)是一种受到高度调控的十二聚体酶,它催化嘧啶生物合成中的首个关键步骤。在结合配体时,ATCase会经历从低活性T态到高活性R态的构象转变。这种转变涉及分子结构的重大变化,包括几个亚基间界面的结构重排以及分子沿其三倍轴方向12埃的扩张。溶质诱导的渗透压应激实验表明,ATCase在结合底物时大约会吸收208个溶剂水分子。对ATCase的T构象和R构象进行的溶剂可及表面积计算与该结果非常吻合,预测在此构象变化过程中大约会吸收189个水分子。对ATCase催化三聚体的渗透压应激测量和表面积计算均预测,在三聚体结合配体时会有水分子释放。文中还讨论了将渗透压应激应用于ATCase的具体方面,包括溶质大小效应,以及对这些结果潜在的其他解释的评估。

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