Symersky J, Patti J M, Carson M, House-Pompeo K, Teale M, Moore D, Jin L, Schneider A, DeLucas L J, Höök M, Narayana S V
Center for Macromolecular Crystallography, University of Alabama at Birmingham 35294, USA.
Nat Struct Biol. 1997 Oct;4(10):833-8. doi: 10.1038/nsb1097-833.
The crystal structure of the recombinant 19,000 M(r) binding domain from the Staphylococcus aureus collagen adhesin has been determined at 2 A resolution. The domain fold is a jelly-roll, composed of two antiparallel beta-sheets and two short alpha-helices. Triple-helical collagen model probes were used in a systematic docking search to identify the collagen-binding site. A groove on beta-sheet I exhibited the best surface complementarity to the collagen probes. This site partially overlaps with the peptide sequence previously shown to be critical for collagen binding. Recombinant proteins containing single amino acid mutations designed to disrupt the surface of the putative binding site exhibited significantly lower affinities for collagen. Here we present a structural perspective for the mode of collagen binding by a bacterial surface protein.
已在2埃分辨率下确定了金黄色葡萄球菌胶原蛋白黏附素重组19,000 M(r)结合结构域的晶体结构。该结构域折叠为果冻卷结构,由两个反平行的β-折叠片和两个短α-螺旋组成。使用三螺旋胶原蛋白模型探针进行系统对接搜索以识别胶原蛋白结合位点。β-折叠片I上的一个凹槽与胶原蛋白探针表现出最佳的表面互补性。该位点与先前显示对胶原蛋白结合至关重要的肽序列部分重叠。含有设计用于破坏假定结合位点表面的单个氨基酸突变的重组蛋白对胶原蛋白的亲和力显著降低。在此,我们展示了细菌表面蛋白与胶原蛋白结合模式的结构观点。