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血影蛋白重复序列的溶液结构:一种左手反平行三螺旋卷曲螺旋结构。

Solution structure of the spectrin repeat: a left-handed antiparallel triple-helical coiled-coil.

作者信息

Pascual J, Pfuhl M, Walther D, Saraste M, Nilges M

机构信息

European Molecular Biology Laboratory, Meyerhofstr. 1, Heidelberg, 69012, Germany.

出版信息

J Mol Biol. 1997 Oct 31;273(3):740-51. doi: 10.1006/jmbi.1997.1344.

Abstract

Cytoskeletal proteins belonging to the spectrin family have an elongated structure composed of repetitive units. The three-dimensional solution structure of the 16th repeat from chicken brain alpha-spectrin (R16) has been determined by NMR spectroscopy and distance geometry-simulated annealing calculations. We used a total of 1035 distance restraints, which included 719 NOE-based values obtained by applying the ambiguous restraints for iterative assignment (ARIA) method. In addition, we performed a direct refinement against 1H-chemical shifts. The final ensemble of 20 structures shows an average RMSD of 1.52 A from the mean for the backbone atoms, excluding loops and N and C termini. R16 is made up of three antiparallel alpha-helices separated by two loops, and folds into a left-handed coiled-coil. The basic unit of spectrin is an antiparallel heterodimer composed of two homologous chains, beta and alpha. These assemble a tetramer via a mechanism that relies on the completion of a single repeat by association of the partial repeats located at the C terminus of the beta-chain (two helices) and at the N terminus of the alpha-chain (one helix). This tetramer is the assemblage able to cross-link actin filaments. Model building by homology of the "tetramerization" repeat from human erythrocyte spectrin illuminates the possible role of point mutations which cause hemolytic anemias.

摘要

属于血影蛋白家族的细胞骨架蛋白具有由重复单元组成的细长结构。通过核磁共振光谱法和距离几何模拟退火计算确定了来自鸡脑α-血影蛋白第16个重复片段(R16)的三维溶液结构。我们总共使用了1035个距离约束,其中包括通过应用迭代归属模糊约束(ARIA)方法获得的719个基于核Overhauser效应(NOE)的值。此外,我们针对1H化学位移进行了直接精修。最终的20个结构的集合显示,排除环以及N和C末端,主链原子的平均均方根偏差(RMSD)为1.52埃。R16由三个由两个环分隔的反平行α螺旋组成,并折叠成左手卷曲螺旋。血影蛋白的基本单位是由两条同源链β和α组成的反平行异源二聚体。这些通过一种机制组装成四聚体,该机制依赖于位于β链C末端(两个螺旋)和α链N末端(一个螺旋)的部分重复序列的结合来完成单个重复序列。这个四聚体是能够交联肌动蛋白丝的组合体。通过对人红细胞血影蛋白“四聚化”重复序列进行同源性建模,阐明了导致溶血性贫血的点突变的可能作用。

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