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Positioning of 72 potentially full size LTRs of human endogenous retroviruses HERV-K on the human chromosome 19 map. Occurrences of the LTRs in human gene sites.

作者信息

Vinogradova T, Volik S, Lebedev Y u, Shevchenko Y u, Lavrentyeva I, Khil P, Grzeschik K H, Ashworth L K, Sverdlov E

机构信息

Shemyakin Institute of Bioorganic Chemistry, Russian Academy of Science, Miklukho-Maklaya, Moscow.

出版信息

Gene. 1997 Oct 15;199(1-2):255-64. doi: 10.1016/s0378-1119(97)00376-4.

DOI:10.1016/s0378-1119(97)00376-4
PMID:9358063
Abstract

Seventy-two near full size long terminal repeats (LTRs) of human endogenous retrovirus of K-family (HERV-K) have been precisely located on the metric map of human chromosome 19. The LTR-related sequences were identified and assigned to cosmids by hybridization with two independent chromosome 19 specific cDNA clones corresponding to different parts of U3 region of LTR of HERV-K. The presence of full-size LTR sequences in a cosmid was further verified by PCR assay with a pair of primers complementary to the termini of the LTR. Coincidences of the LTR and the known genes positions are discussed.

摘要

相似文献

1
Positioning of 72 potentially full size LTRs of human endogenous retroviruses HERV-K on the human chromosome 19 map. Occurrences of the LTRs in human gene sites.
Gene. 1997 Oct 15;199(1-2):255-64. doi: 10.1016/s0378-1119(97)00376-4.
2
Subfamilies and nearest-neighbour dendrogram for the LTRs of human endogenous retroviruses HERV-K mapped on human chromosome 19: physical neighbourhood does not correlate with identity level.映射在人类19号染色体上的人类内源性逆转录病毒HERV-K的长末端重复序列(LTR)的亚家族和最近邻系统树图:物理邻域与同一性水平不相关。
Hum Genet. 1998 Jan;102(1):107-16. doi: 10.1007/s004390050662.
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Physical mapping of sequences homologous to an endogenous retrovirus LTR on human chromosome 19.
Mol Gen Genet. 1995 Jun 25;247(6):742-8. doi: 10.1007/BF00290406.
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Genomic distribution and transcription of solitary HERV-K LTRs.孤立的人内源性逆转录病毒K长末端重复序列的基因组分布与转录
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[Structural characteristics of four long terminal repeats (LTR) of human endogenous retroviruses and features of their integration sites].[人类内源性逆转录病毒四个长末端重复序列(LTR)的结构特征及其整合位点的特点]
Bioorg Khim. 1997 May;23(5):434-40.
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Nucleotide sequence and phylogenetic analysis of long terminal repeats of human endogenous retrovirus K family (HERV-K) on human chromosomes.人类染色体上人类内源性逆转录病毒K家族(HERV-K)长末端重复序列的核苷酸序列及系统发育分析
Microb Comp Genomics. 2000;5(3):121-7. doi: 10.1089/omi.1.2000.5.121.
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[New putative gene from human retrovirus-containing locus on chromosome 19].[来自19号染色体上含人类逆转录病毒位点的新推定基因]
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Transcription of HERV-K-related LTRs in human placenta and leukemic cells.
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Long terminal repeats of human endogenous retrovirus K family (HERV-K) specifically bind host cell nuclear proteins.
FEBS Lett. 1998 Jan 16;421(3):229-33. doi: 10.1016/s0014-5793(97)01569-x.
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Molecular biology of type A endogenous retrovirus.A型内源性逆转录病毒的分子生物学
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