Zhou J, Adams J A
Department of Chemistry, San Diego State University, San Diego, California 92182-1030, USA.
Biochemistry. 1997 Dec 16;36(50):15733-8. doi: 10.1021/bi971438n.
Pre-steady-state kinetic analyses of the catalytic subunit of cAMP-dependent protein kinase showed that the rate constant for phosphoryl transfer is fast and either the release of one or both of the products or a conformational change controls turnover [Grant, B., & Adams, J. A. (1996) Biochemistry 35, 2022-2029]. To determine which step or steps control turnover in the wild-type enzyme, we used a catalytic trapping technique to measure directly the dissociation rate constant for ADP. The phosphorylation of two peptide substrates, LRRASLG and GRTGRRNSI, was monitored using a rapid quench flow technique under conditions where saturating concentrations of ADP were preequilibrated with the enzyme before excess ATP and one of the substrates were added to trap the free enzyme and to start the phosphorylation reaction. Under ADP preequilibration conditions, no 'burst' phase was observed, and although the rate of linear, steady-state turnover was unaffected, the net production of phosphopeptide lagged behind the non-preequilibrated control. This phenomenon occurs due to the slow release of the product, and kinetic modeling suggests that this effect can be explained if the dissociation rate constant for ADP is 24 s-1 and solely limits turnover (kcat = 23 s-1) for the phosphorylation of LRRASLG. Using GRTGRRNSI, the dissociation rate constant for ADP is 35 s-1 and limits turnover (kcat = 29 s-1) if the reaction is initiated by the addition of enzyme. Under preequilibration conditions with either ATP or GRTGRRNSI, turnover is approximately 50% lower, suggesting that ADP release may partially control this parameter. This preequilibration effect can be explained by slowly interconverting enzyme forms with specific peptide-induced turnover properties. These studies indicate that ADP release is an essential rate-limiting component for turnover but also suggests that other factors contribute subtly when the structure of the substrate is altered.
环磷酸腺苷依赖性蛋白激酶催化亚基的稳态前动力学分析表明,磷酰基转移的速率常数很快,并且产物之一或两者的释放或构象变化控制着周转[格兰特,B.,&亚当斯,J.A.(1996年)《生物化学》35卷,2022 - 2029页]。为了确定野生型酶中控制周转的一个或多个步骤,我们使用了一种催化捕获技术来直接测量ADP的解离速率常数。在饱和浓度的ADP与酶预先平衡,然后加入过量ATP和其中一种底物以捕获游离酶并启动磷酸化反应的条件下,使用快速淬灭流动技术监测两种肽底物LRRASLG和GRTGRRNSI的磷酸化。在ADP预平衡条件下,未观察到“爆发”阶段,尽管线性稳态周转速率未受影响,但磷酸肽的净产生落后于非预平衡对照。这种现象是由于产物释放缓慢所致,动力学模型表明,如果ADP的解离速率常数为24 s⁻¹且仅限制LRRASLG磷酸化的周转(kcat = 23 s⁻¹),则可以解释这种效应。对于GRTGRRNSI,如果反应由酶的添加引发,ADP的解离速率常数为35 s⁻¹并限制周转(kcat = 29 s⁻¹)。在与ATP或GRTGRRNSI的预平衡条件下,周转大约降低50%,这表明ADP释放可能部分控制该参数。这种预平衡效应可以通过具有特定肽诱导周转特性的酶形式缓慢相互转化来解释。这些研究表明,ADP释放是周转的一个重要限速成分,但也表明当底物结构改变时,其他因素也有微妙的贡献。