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标量耦合氘对15N原子核弛豫的影响及其作为蛋白质侧链相互作用探针的潜在应用。

The influence of a scalar-coupled deuterium upon the relaxaton of a 15N Nucleus and its possible exploitation as a probe for side-chain interactions in proteins.

作者信息

Boyd J, Mal T K, Soffe N, Campbell I D

机构信息

Department of Biochemistry and Oxford Centre for Molecular Sciences, UK.

出版信息

J Magn Reson. 1997 Jan;124(1):61-71. doi: 10.1006/jmre.1996.7482.

DOI:10.1006/jmre.1996.7482
PMID:9424319
Abstract

The magnitude of the quadrupole coupling constant (e2Qq/h) of a deuteron is a good probe for hydrogen bonding. In protein structures, hydrogen-bonding interactions between side chains, between side chaings and ligands, and between side chains and solvent are frequently found. An experiment that detects, via scalar coupling, the influence of a deuteron on the 15N nucleus of asparagine or glutamine side chains is presented. The experiment depends upon the resolution of the 1 delta 15 N(D) isotope shifts that allow the various isotopomers and isotopologues to be distinguished when 15N-labeled samples are dissolved in solvent mixtures of H2O/D2O. 15N lineshapes with theoretical simulations that provide estimates for the 2H quadrupole coupling constants are presented. The influence of 15N-2H dipolar-quadrupole cross correlation and the resulting small frequency shifts in the 15N multiplet are resolved in some of the spectra. The experimental data are provided using the free amino acids asparagine and glutamine for which the side chains were isotopically enriched in 15N and the recombinant pair of modules, fibronectin type 1 and epidermal growth factor, (F1-G) of tissue plasminogen activator, which were uniformly isotopically enriched in 15N.

摘要

氘核的四极耦合常数(e2Qq/h)大小是氢键的良好探针。在蛋白质结构中,经常发现侧链之间、侧链与配体之间以及侧链与溶剂之间的氢键相互作用。本文介绍了一项通过标量耦合检测氘核对天冬酰胺或谷氨酰胺侧链的15N核影响的实验。该实验依赖于1δ15N(D)同位素位移的分辨率,当15N标记的样品溶解在H2O/D2O的溶剂混合物中时,这些位移能使各种同位素异构体和同位素类似物得以区分。文中给出了15N线形以及理论模拟结果,这些模拟为2H四极耦合常数提供了估计值。在一些光谱中解析了15N-2H偶极-四极交叉相关性的影响以及15N多重峰中由此产生的小频率位移。实验数据使用了侧链在15N中同位素富集的游离氨基酸天冬酰胺和谷氨酰胺,以及组织纤溶酶原激活剂的重组模块对1型纤连蛋白和表皮生长因子(F1-G),它们在15N中均匀同位素富集。

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