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螺旋特异性相互作用在浓盐溶液中诱导鸟苷四链螺旋的凝聚。

Helix-specific interactions induce condensation of guanosine four-stranded helices in concentrated salt solutions.

作者信息

Mariani P, Ciuchi F, Saturni L

机构信息

Istituto di Scienze Fisiche, Facoltà di Medicina e Chirurgia, Università di Ancona, Italy.

出版信息

Biophys J. 1998 Jan;74(1):430-5. doi: 10.1016/S0006-3495(98)77800-2.

Abstract

Deoxyguanosine-5'-monophosphate in water self-associates into stable structures, which include liquid-crystalline hexagonal and cholesteric phases. The structural unit is a four-stranded helix, composed of stacked Hoogsteen-bonded guanosine quartets. By using the osmotic stress method, we recently measured the force between helices in KCl solutions up to 2 M. In addition to the long-range electrostatic force, a short-range hydration repulsive contribution was recognized. The hydration repulsion is exponential, and shows a decay length independent from the ionic strength of the solution. Here, we report that more concentrated KCl solutions cause condensation of the guanosine helix in a hexagonal phase with constant equilibrium separation of approximately 7 A between helix surfaces. Long-range attraction, which induces the self-assembly, and short-range repulsion, which prevents the contact between the helices, are implied. By using osmotic stress, the force needed to push helices closer from the spontaneously assumed position has been measured. The attractive force was then estimated as a difference between the net force and the repulsive contribution, revealing an exponential decay length about two times larger than that of the short-range repulsion. The agreement with the helix interaction theory introduced recently by Kornyshev and Leikin (Kornyshev, A. A., and S. Leikin, 1997. Theory of interaction between helical molecules. J. Phys. Chem. 107:3656-3674) suggests that the repulsive and attractive forces originate from helix-specific interactions.

摘要

水中的脱氧鸟苷 - 5'-单磷酸会自缔合形成稳定结构,其中包括液晶六方相和胆甾相。结构单元是一个四链螺旋,由堆叠的Hoogsteen键合鸟苷四联体组成。我们最近使用渗透压法测量了高达2 M的KCl溶液中螺旋之间的力。除了长程静电力外,还识别出了短程水合排斥作用。水合排斥作用是指数形式的,并且其衰减长度与溶液的离子强度无关。在此,我们报告更浓的KCl溶液会导致六方相中的鸟苷螺旋凝聚,螺旋表面之间的平衡间距恒定约为7 Å。这意味着存在诱导自组装的长程吸引力以及防止螺旋相互接触的短程排斥力。通过使用渗透压,测量了将螺旋从自发假定位置推近所需的力。然后将吸引力估计为净力与排斥作用之间的差值,结果显示其指数衰减长度约为短程排斥力的两倍。这与Kornyshev和Leikin最近提出的螺旋相互作用理论(Kornyshev, A. A., and S. Leikin, 1997. Theory of interaction between helical molecules. J. Phys. Chem. 107:3656 - 3674)相符,表明排斥力和吸引力源自螺旋特异性相互作用。

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