• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

水辐射分解中扩散与反应的蒙特卡罗模拟——反应物“穿越”及跳跃距离的研究

Monte Carlo simulation of diffusion and reaction in water radiolysis--a study of reactant 'jump through' and jump distances.

作者信息

Hamm R N, Turner J E, Stabin M G

机构信息

Life Sciences Division, Oak Ridge National Laboratory, TN 37831, USA.

出版信息

Radiat Environ Biophys. 1998 Feb;36(4):229-34. doi: 10.1007/s004110050076.

DOI:10.1007/s004110050076
PMID:9523338
Abstract

In Monte Carlo simulations of water radiolysis, the diffusion of reactants can be approximated by "jumping" all species randomly, to represent the passage of a short period of time, and then checking their separations. If, at the end of a jump, two reactant species are within a distance equal to the reaction radius for the pair, they are allowed to react in the model. In principle, the possibility exists that two reactants could "jump through" one another and end up with a separation larger than the reaction radius with no reaction being scored. Ignoring this possibility would thus reduce the rate of reaction below that intended by such a model. By making the jump times and jump distances shorter, any error introduced by 'jump through' is made smaller. This paper reports numerical results of a systematic study of 'jump through' in Monte Carlo simulations of water radiolysis. With a nominal jump time of 3 ps, it is found that more than 40% of the reactions of the hydrated electron with itself and of the H atom with itself occur when reactions during 'jump through' are allowed. For all other reactions, for which the effect is smaller, the contributions of 'jump through' lie in the range 1%-16% of the total. Corrections to computed rate constants for two reactions are evaluated for jump times between 0.1 and 30 ps. It is concluded that jump-through corrections are desirable in such models for jump times that exceed about 1 ps or even less. In a separate study, we find that giving all species of a given type the same size jump in a random direction yields results that are indistinguishable from those when the jump sizes are selected from a Gaussian distribution. In this comparison, the constant jump size is taken to be the root-mean-square jump size from the Gaussian distribution.

摘要

在水辐射分解的蒙特卡罗模拟中,反应物的扩散可以通过随机“跳跃”所有物种来近似,以表示短时间的流逝,然后检查它们之间的距离。如果在一次跳跃结束时,两种反应物物种之间的距离等于该对物种的反应半径,则它们在模型中可以发生反应。原则上,存在两种反应物可能“相互穿过”并最终分离距离大于反应半径而未记录任何反应的可能性。忽略这种可能性会使反应速率低于该模型预期的速率。通过使跳跃时间和跳跃距离更短,“穿过”引入的任何误差都会更小。本文报告了在水辐射分解的蒙特卡罗模拟中对“穿过”进行系统研究的数值结果。在标称跳跃时间为3皮秒的情况下,发现当允许“穿过”过程中的反应时,水合电子自身以及氢原子自身的反应中有超过40%会发生。对于所有其他影响较小的反应,“穿过”的贡献占总数的1% - 16%。针对0.1到30皮秒之间的跳跃时间,评估了对两种反应计算得到的速率常数的校正。得出的结论是,对于超过约1皮秒甚至更短的跳跃时间,在这样的模型中进行“穿过”校正很有必要。在另一项研究中,我们发现给给定类型的所有物种在随机方向上赋予相同大小的跳跃所产生的结果与从高斯分布中选择跳跃大小时的结果无法区分。在这种比较中,恒定跳跃大小被取为高斯分布的均方根跳跃大小。

相似文献

1
Monte Carlo simulation of diffusion and reaction in water radiolysis--a study of reactant 'jump through' and jump distances.水辐射分解中扩散与反应的蒙特卡罗模拟——反应物“穿越”及跳跃距离的研究
Radiat Environ Biophys. 1998 Feb;36(4):229-34. doi: 10.1007/s004110050076.
2
Investigation of a Monte Carlo model for chemical reactions.
Radiat Environ Biophys. 1998 Oct;37(3):151-6. doi: 10.1007/s004110050110.
3
Product yields from irradiated glycylglycine in oxygen-free solutions: Monte Carlo simulations and comparison with experiments.无氧溶液中辐照甘氨酰甘氨酸的产物产率:蒙特卡罗模拟及与实验的比较
Radiat Environ Biophys. 1998 Oct;37(3):157-66. doi: 10.1007/s004110050111.
4
Validation and investigation of reactive species yields of Geant4-DNA chemistry models.验证和研究 Geant4-DNA 化学模型的活性物种产率。
Med Phys. 2019 Feb;46(2):983-998. doi: 10.1002/mp.13332. Epub 2018 Dec 26.
5
Water radiolysis with heavy ions of energies up to 28 GeV. 3. Measurement of G(MV*+) in deaerated methyl viologen solutions containing various concentrations of sodium formate and Monte Carlo simulation.能量高达28 GeV的重离子引发的水辐射分解。3. 在含有不同浓度甲酸钠的除气甲基紫精溶液中对G(MV*+)的测量及蒙特卡罗模拟
Radiat Res. 2008 Oct;170(4):521-33. doi: 10.1667/rr1203.1.
6
Monte Carlo calculation of the primary radical and molecular yields of liquid water radiolysis in the linear energy transfer range 0.3-6.5 keV/micrometer: application to 137Cs gamma rays.在0.3 - 6.5 keV/微米线性能量转移范围内液态水辐射分解的初级自由基和分子产率的蒙特卡罗计算:应用于137Csγ射线
Radiat Res. 2001 Feb;155(2):269-78. doi: 10.1667/0033-7587(2001)155[0269:mccotp]2.0.co;2.
7
Temperature dependence of the Fricke dosimeter and spur expansion time in the low-LET high-temperature radiolysis of water up to 350 °C: a Monte-Carlo simulation study.温度对 Fricke 剂量计的影响以及在低 LET 高温水辐解中spur expansion time(扩展时间)的影响,最高可达 350°C:蒙特卡罗模拟研究。
Phys Chem Chem Phys. 2011 Jun 14;13(22):10690-8. doi: 10.1039/c1cp20293f. Epub 2011 May 9.
8
Modeling the radiolysis of supercritical water by fast neutrons: density dependence of the yields of primary species at 400°c.快中子对超临界水辐射分解的建模:400°C 下初级产物产率的密度依赖性
Radiat Res. 2014 Dec;182(6):695-704. doi: 10.1667/RR13715.1.
9
Simulation of the radiolysis of water using Green's functions of the diffusion equation.利用扩散方程的格林函数对水的辐射分解进行模拟。
Radiat Prot Dosimetry. 2015 Sep;166(1-4):24-8. doi: 10.1093/rpd/ncv179. Epub 2015 Apr 20.
10
Hydrated electron yields in the heavy ion radiolysis of water.水重离子辐解中电子水合产额
J Phys Chem A. 2005 Oct 27;109(42):9393-401. doi: 10.1021/jp0530303.

引用本文的文献

1
Accelerated Monte Carlo simulation on the chemical stage in water radiolysis using GPU.利用图形处理器(GPU)对水辐射分解化学阶段进行加速蒙特卡罗模拟。
Phys Med Biol. 2017 Apr 21;62(8):3081-3096. doi: 10.1088/1361-6560/aa6246. Epub 2017 Mar 21.
2
Risk to fragmented DNA in dry, wet, and frozen states from computed tomography: a comparative theoretical study.计算机断层扫描对干燥、湿润和冷冻状态下的碎片化DNA的风险:一项比较理论研究。
Radiat Environ Biophys. 2016 May;55(2):229-41. doi: 10.1007/s00411-016-0637-6. Epub 2016 Feb 16.
3
Interaction of ion tracks in spatial and temporal proximity.
空间和时间上接近的离子径迹的相互作用。
Radiat Environ Biophys. 2009 Nov;48(4):349-59. doi: 10.1007/s00411-009-0234-z. Epub 2009 Jul 12.
4
Characterization of the peroxidase mechanism upon reaction of prostacyclin synthase with peracetic acid. Identification of a tyrosyl radical intermediate.前列环素合酶与过氧乙酸反应时过氧化物酶机制的表征。酪氨酸自由基中间体的鉴定。
Biochemistry. 2009 Feb 10;48(5):917-28. doi: 10.1021/bi801382v.
5
Time- and space-resolved Monte Carlo study of water radiolysis for photon, electron and ion irradiation.光子、电子和离子辐照下水辐射分解的时间和空间分辨蒙特卡罗研究
Radiat Environ Biophys. 2009 Feb;48(1):11-20. doi: 10.1007/s00411-008-0194-8. Epub 2008 Oct 24.
6
Simulation of (125)I decay in a synthetic oligodeoxynucleotide with normal and distorted geometry and the role of radiation and non-radiation actions.正常和扭曲几何结构的合成寡脱氧核苷酸中¹²⁵I衰变的模拟以及辐射和非辐射作用的角色。
Radiat Environ Biophys. 2004 May;43(1):23-33. doi: 10.1007/s00411-004-0231-1. Epub 2004 Mar 23.