Kusunoki H, Wakamatsu K, Sato K, Miyazawa T, Kohno T
Mitsubishi Kasei Institute of Life Sciences, Minamiooya, Machida-shi, Tokyo 194, Japan.
Biochemistry. 1998 Apr 7;37(14):4782-90. doi: 10.1021/bi972756p.
Mastoparans, a family of tetradecapeptides from wasp venom, have been used as convenient low molecular weight models of receptors coupled to GTP-binding regulatory proteins (G proteins) for the understanding of the interaction between G proteins and receptors. Sukumar and Higashijima have analyzed the conformation of mastoparan-X (MP-X) bound to the G protein alpha-subunit using proton two-dimensional transferred nuclear Overhauser effect (TRNOE) spectroscopy [Sukumar, M., and Higashijima, T. (1992) J. Biol. Chem., 267, 21421-21424]. The resultant structure, however, was not well-defined due to severe overlap of peptide proton resonances. To determine the G protein-bound conformation of MP-X in detail, we have analyzed this interaction by heteronuclear multidimensional TRNOE experiments of MP-X uniformly enriched with 15N and/or 13C. By solving the overlap problem, we were able to determine the precise conformation of MP-X bound to Gi1alpha: the peptide adopts an amphiphilic alpha-helix from Trp3 to C-terminal Leu14, and the atomic root-mean-square deviation (rmsd) values in this portion about the averaged coordinates were 0.27 +/- 0.07 A for the backbone atoms (N, Calpha, C') and 0.84 +/- 0.16 A for all heavy atoms. These values are much smaller than the corresponding rmsd values of the structures obtained from the proton 2D TRNOE spectrum alone: 1.70 +/- 0.41 A for the backbone atoms (N, Calpha, C') and 2.84 +/- 0.51 A for all heavy atoms. Our results indicate that the heteronuclear multidimensional TRNOE experiments of peptides uniformly enriched with stable isotopes are a very powerful tool for analyzing the conformation of short peptides bound to large proteins. We will also discuss the structure-activity relationships of mastoparans in activating G proteins on the basis of the precise structure of MP-X bound to Gi1alpha.
马斯托帕兰是一类来自黄蜂毒液的十四肽,已被用作与GTP结合调节蛋白(G蛋白)偶联的受体的便捷低分子量模型,以了解G蛋白与受体之间的相互作用。苏库马尔和东岛利用质子二维转移核Overhauser效应(TRNOE)光谱分析了与G蛋白α亚基结合的马斯托帕兰-X(MP-X)的构象[Sukumar, M., and Higashijima, T. (1992) J. Biol. Chem., 267, 21421-21424]。然而,由于肽质子共振的严重重叠,所得结构并不明确。为了详细确定MP-X与G蛋白结合的构象,我们通过对均匀富集15N和/或13C的MP-X进行异核多维TRNOE实验来分析这种相互作用。通过解决重叠问题,我们能够确定与Gi1α结合的MP-X的精确构象:该肽从Trp3到C端Leu14形成两亲性α螺旋,该部分中关于平均坐标的原子均方根偏差(rmsd)值,主链原子(N、Calpha、C')为0.27±0.07 Å,所有重原子为0.84±0.16 Å。这些值远小于仅从质子二维TRNOE光谱获得的结构的相应rmsd值:主链原子(N、Calpha、C')为1.70±0.41 Å,所有重原子为2.84±0.51 Å。我们的结果表明,对均匀富集稳定同位素的肽进行异核多维TRNOE实验是分析与大蛋白结合的短肽构象的非常强大的工具。我们还将基于与Gi1α结合的MP-X的精确结构讨论马斯托帕兰在激活G蛋白方面的构效关系。