Fujiwara Toshimichi, Todokoro Yasuto, Yanagishita Hajime, Tawarayama Midori, Kohno Toshiyuki, Wakamatsu Kaori, Akutsu Hideo
Institute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, 565-0871 Japan.
J Biomol NMR. 2004 Apr;28(4):311-25. doi: 10.1023/B:JNMR.0000015377.17021.b0.
Carbon-13 and nitrogen-15 signals of fully isotope-labeled 15-residue peptide, glycinated mastoparan-X, in a solid state were assigned by two- and three-dimensional NMR experiments under magic-angle spinning conditions. Intra-residue spin connectivities were obtained with multidimensional correlation experiments for C'-C(alpha)-C(beta) and N-C(alpha)-C(beta). Sequence specific assignments were performed with inter-residue C(alpha)-C(alpha) and N-C(alpha)C(beta) correlation experiments. Pulse sequences for these experiments have mixing periods under recoupled zero- and double-quantum (13)C-(13)C and (15)N-(13)C dipolar interactions. These correlation spectra allowed the complete assignments of (13)C and (15)N backbone and (13)C(beta) signals. Chemical shift analysis of the (13)C and (15)N signals based on empirical and quantum chemical databases for proteins indicated that the backbone between residues 3 and 14 forms alpha-helix and residue 2 has extended conformation in the solid state. This structure was compared with the G-protein- and membrane-bound structures of mastoparan-X.
在魔角旋转条件下,通过二维和三维核磁共振实验对全同位素标记的15个残基肽(甘氨酸化马蜂毒素-X)的碳-13和氮-15信号进行了固态归属。通过针对C'-C(α)-C(β)和N-C(α)-C(β)的多维相关实验获得了残基内自旋连接性。通过残基间C(α)-C(α)和N-C(α)-C(β)相关实验进行了序列特异性归属。这些实验的脉冲序列在重新耦合的零量子和双量子(13)C-(13)C以及(15)N-(13)C偶极相互作用下具有混合期。这些相关光谱允许对(13)C和(15)N主链以及(13)C(β)信号进行完全归属。基于蛋白质的经验和量子化学数据库对(13)C和(15)N信号进行化学位移分析表明,残基3和14之间的主链形成α-螺旋,并且残基2在固态中具有伸展构象。将该结构与马蜂毒素-X的G蛋白结合结构和膜结合结构进行了比较。