Banci L, Bertini I, De la Rosa M A, Koulougliotis D, Navarro J A, Walter O
Department of Chemistry, University of Florence, Florence, Italy.
Biochemistry. 1998 Apr 7;37(14):4831-43. doi: 10.1021/bi972765y.
Cytochrome c6 from Monoraphidium braunii, an 89-amino acid electron transfer protein, has been investigated by NMR in solution, in its oxidized form, at pH 7 and 300 K. By using a combination of COSY, TOCSY, and NOESY experiments, 84% of the proton resonances have been assigned. A total of 1668 experimental NOE constraints, 1109 of which were meaningful, together with 288 pseudocontact shifts, have been used to determine the structure in solution. This is represented as a family of 40 structures which have been energy minimized. The rmsd values with respect to the mean structure are 0.57 +/- 0.08 and 0.94 +/- 0.09 A for the backbone and heavy atoms, respectively. The structure has been found to be very similar to that of the reduced form, except for a rearrangement in propionate 7, a feature which has been observed in all c-type cytochromes investigated so far. Such a feature could be relevant for the efficiency of the electron transfer pathway with either the oxidizing or the reducing partners. Other differences in the oxidation states have been noted in the region proposed to be involved in the interaction with the physiological partners.
来自布朗单歧藻的细胞色素c6是一种含89个氨基酸的电子传递蛋白,已在pH 7和300 K条件下,对其氧化态在溶液中进行了核磁共振研究。通过结合使用COSY、TOCSY和NOESY实验,已归属了84%的质子共振信号。总共1668个实验性NOE约束条件(其中1109个是有意义的)以及288个赝接触位移被用于确定溶液中的结构。所得结构表示为一组经能量最小化处理的40种结构。相对于平均结构,主链和重原子的均方根偏差(rmsd)值分别为0.57±0.08 Å和0.94±0.09 Å。已发现该结构与还原态的结构非常相似,只是7位丙酸酯发生了重排,这一特征在迄今为止研究的所有c型细胞色素中均有观察到。这样的特征可能与电子传递途径与氧化或还原伙伴相互作用的效率有关。在提议参与与生理伙伴相互作用的区域中,也注意到了氧化态的其他差异。