• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

杂交萘和2,4-二硝基甲苯双加氧酶系统的底物特异性

Substrate specificities of hybrid naphthalene and 2,4-dinitrotoluene dioxygenase enzyme systems.

作者信息

Parales R E, Emig M D, Lynch N A, Gibson D T

机构信息

Department of Microbiology and Center for Biocatalysis and Bioprocessing, University of Iowa, Iowa City 52242, USA.

出版信息

J Bacteriol. 1998 May;180(9):2337-44. doi: 10.1128/JB.180.9.2337-2344.1998.

DOI:10.1128/JB.180.9.2337-2344.1998
PMID:9573183
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC107173/
Abstract

Bacterial three-component dioxygenase systems consist of reductase and ferredoxin components which transfer electrons from NAD(P)H to a terminal oxygenase. In most cases, the oxygenase consists of two different subunits (alpha and beta). To assess the contributions of the alpha and beta subunits of the oxygenase to substrate specificity, hybrid dioxygenase enzymes were formed by coexpressing genes from two compatible plasmids in Escherichia coli. The activities of hybrid naphthalene and 2,4-dinitrotoluene dioxygenases containing four different beta subunits were tested with four substrates (indole, naphthalene, 2,4-dinitrotoluene, and 2-nitrotoluene). In the active hybrids, replacement of small subunits affected the rate of product formation but had no effect on the substrate range, regiospecificity, or enantiomeric purity of oxidation products with the substrates tested. These studies indicate that the small subunit of the oxygenase is essential for activity but does not play a major role in determining the specificity of these enzymes.

摘要

细菌三组分双加氧酶系统由还原酶和铁氧化还原蛋白组分组成,它们将电子从NAD(P)H传递给末端加氧酶。在大多数情况下,加氧酶由两个不同的亚基(α和β)组成。为了评估加氧酶的α和β亚基对底物特异性的贡献,通过在大肠杆菌中共表达来自两个相容质粒的基因来形成杂合双加氧酶。用四种底物(吲哚、萘、2,4-二硝基甲苯和2-硝基甲苯)测试了含有四种不同β亚基的杂合萘和2,4-二硝基甲苯双加氧酶的活性。在有活性的杂合体中,小亚基的替换影响产物形成速率,但对测试底物的底物范围、区域特异性或氧化产物的对映体纯度没有影响。这些研究表明,加氧酶的小亚基对活性至关重要,但在决定这些酶的特异性方面不发挥主要作用。

相似文献

1
Substrate specificities of hybrid naphthalene and 2,4-dinitrotoluene dioxygenase enzyme systems.杂交萘和2,4-二硝基甲苯双加氧酶系统的底物特异性
J Bacteriol. 1998 May;180(9):2337-44. doi: 10.1128/JB.180.9.2337-2344.1998.
2
Orthric Rieske dioxygenases for degrading mixtures of 2,4-dinitrotoluene/naphthalene and 2-amino-4,6-dinitrotoluene/4-amino-2,6-dinitrotoluene.
Appl Microbiol Biotechnol. 2006 Dec;73(4):827-38. doi: 10.1007/s00253-006-0538-8. Epub 2006 Aug 25.
3
Enzyme specificity of 2-nitrotoluene 2,3-dioxygenase from Pseudomonas sp. strain JS42 is determined by the C-terminal region of the alpha subunit of the oxygenase component.来自假单胞菌属菌株JS42的2-硝基甲苯2,3-双加氧酶的酶特异性由加氧酶组分α亚基的C末端区域决定。
J Bacteriol. 1998 Mar;180(5):1194-9. doi: 10.1128/JB.180.5.1194-1199.1998.
4
Multiple mutations at the active site of naphthalene dioxygenase affect regioselectivity and enantioselectivity.萘双加氧酶活性位点的多个突变会影响区域选择性和对映体选择性。
J Ind Microbiol Biotechnol. 2001 Aug;27(2):94-103. doi: 10.1038/sj.jim.7000168.
5
Desaturation and oxygenation of 1,2-dihydronaphthalene by toluene and naphthalene dioxygenase.甲苯和萘双加氧酶对1,2-二氢萘的去饱和作用及氧化作用
J Bacteriol. 1995 Oct;177(20):5799-805. doi: 10.1128/jb.177.20.5799-5805.1995.
6
Oxidation of 2-methoxynaphthalene by toluene, naphthalene and biphenyl dioxygenases:structure and absolute stereochemistry of metabolites.甲苯、萘和联苯双加氧酶催化2-甲氧基萘的氧化:代谢产物的结构和绝对立体化学
Bioorg Med Chem. 1994 Jul;2(7):727-34. doi: 10.1016/0968-0896(94)85024-0.
7
Desaturation, dioxygenation, and monooxygenation reactions catalyzed by naphthalene dioxygenase from Pseudomonas sp. strain 9816-4.由假单胞菌属菌株9816-4的萘双加氧酶催化的去饱和、双加氧和单加氧反应。
J Bacteriol. 1995 May;177(10):2615-21. doi: 10.1128/jb.177.10.2615-2621.1995.
8
Substrate binding site of naphthalene 1,2-dioxygenase: functional implications of indole binding.萘1,2 -双加氧酶的底物结合位点:吲哚结合的功能意义
J Mol Biol. 2000 Feb 18;296(2):701-12. doi: 10.1006/jmbi.1999.3462.
9
Production of substituted naphthalene dihydrodiols by engineered Escherichia coli containing the cloned naphthalene 1,2-dioxygenase gene from Pseudomonas fluorescens N3.通过含有从荧光假单胞菌N3克隆的萘1,2-双加氧酶基因的工程化大肠杆菌生产取代萘二氢二醇。
Res Microbiol. 1997 May;148(4):355-64. doi: 10.1016/s0923-2508(97)81591-4.
10
2,4-Dinitrotoluene dioxygenase from Burkholderia sp. strain DNT: similarity to naphthalene dioxygenase.来自伯克霍尔德氏菌属菌株DNT的2,4-二硝基甲苯双加氧酶:与萘双加氧酶的相似性。
J Bacteriol. 1996 Aug;178(16):4926-34. doi: 10.1128/jb.178.16.4926-4934.1996.

引用本文的文献

1
The α- and β-Subunit Boundary at the Stem of the Mushroom-Like αβ-Type Oxygenase Component of Rieske Non-Heme Iron Oxygenases Is the Rieske-Type Ferredoxin-Binding Site.蘑菇状 αβ-型双氧酶的 Rieske 非血红素铁加氧酶的 α-和 β-亚基结合界面是 Rieske 型铁氧还蛋白结合位点。
Appl Environ Microbiol. 2022 Aug 9;88(15):e0083522. doi: 10.1128/aem.00835-22. Epub 2022 Jul 13.
2
Isolation and Characterization a Novel Catabolic Gene Cluster Involved in Chlorobenzene Degradation in Haloalkaliphilic sp. HA03.嗜盐碱菌HA03中参与氯苯降解的新型分解代谢基因簇的分离与鉴定
Biology (Basel). 2022 May 9;11(5):724. doi: 10.3390/biology11050724.
3
Structural Insights into Dihydroxylation of Terephthalate, a Product of Polyethylene Terephthalate Degradation.对聚对苯二甲酸乙二醇酯降解产物对苯二甲酸二羟化反应的结构研究。
J Bacteriol. 2022 Mar 15;204(3):e0054321. doi: 10.1128/JB.00543-21. Epub 2022 Jan 10.
4
Microbial Degradation of Naphthalene and Substituted Naphthalenes: Metabolic Diversity and Genomic Insight for Bioremediation.萘及取代萘的微生物降解:生物修复的代谢多样性与基因组学见解
Front Bioeng Biotechnol. 2021 Mar 9;9:602445. doi: 10.3389/fbioe.2021.602445. eCollection 2021.
5
The Metabolic Redox Regime of Pseudomonas putida Tunes Its Evolvability toward Novel Xenobiotic Substrates.铜绿假单胞菌的代谢氧化还原状态调节其对新型异生物质底物的可进化性。
mBio. 2018 Aug 28;9(4):e01512-18. doi: 10.1128/mBio.01512-18.
6
Selection for growth on 3-nitrotoluene by 2-nitrotoluene-utilizing Acidovorax sp. strain JS42 identifies nitroarene dioxygenases with altered specificities.利用2-硝基甲苯的嗜酸菌属菌株JS42在3-硝基甲苯上进行生长筛选,鉴定出具有改变特异性的硝基芳烃双加氧酶。
Appl Environ Microbiol. 2015 Jan;81(1):309-19. doi: 10.1128/AEM.02772-14. Epub 2014 Oct 24.
7
Use of silica-encapsulated Pseudomonas sp. strain NCIB 9816-4 in biodegradation of novel hydrocarbon ring structures found in hydraulic fracturing waters.二氧化硅包封的假单胞菌属菌株NCIB 9816 - 4在生物降解水力压裂水中发现的新型烃环结构中的应用。
Appl Environ Microbiol. 2014 Aug;80(16):4968-76. doi: 10.1128/AEM.01100-14. Epub 2014 Jun 6.
8
The novel bacterial N-demethylase PdmAB is responsible for the initial step of N,N-dimethyl-substituted phenylurea herbicide degradation.新型细菌N-脱甲基酶PdmAB负责N,N-二甲基取代苯基脲类除草剂降解的第一步。
Appl Environ Microbiol. 2013 Dec;79(24):7846-56. doi: 10.1128/AEM.02478-13. Epub 2013 Oct 11.
9
Endogenous stress caused by faulty oxidation reactions fosters evolution of 2,4-dinitrotoluene-degrading bacteria.由错误的氧化反应引起的内源性应激促进了 2,4-二硝基甲苯降解细菌的进化。
PLoS Genet. 2013 Aug;9(8):e1003764. doi: 10.1371/journal.pgen.1003764. Epub 2013 Aug 29.
10
Characterization of a novel Rieske-type alkane monooxygenase system in Pusillimonas sp. strain T7-7.新型 Rieske 型烷烃单加氧酶系统在 Pusillimonas sp. 菌株 T7-7 中的特征。
J Bacteriol. 2013 May;195(9):1892-901. doi: 10.1128/JB.02107-12. Epub 2013 Feb 15.

本文引用的文献

1
Structure of an aromatic-ring-hydroxylating dioxygenase-naphthalene 1,2-dioxygenase.芳香环羟基化双加氧酶-萘1,2-双加氧酶的结构
Structure. 1998 May 15;6(5):571-86. doi: 10.1016/s0969-2126(98)00059-8.
2
Enzyme specificity of 2-nitrotoluene 2,3-dioxygenase from Pseudomonas sp. strain JS42 is determined by the C-terminal region of the alpha subunit of the oxygenase component.来自假单胞菌属菌株JS42的2-硝基甲苯2,3-双加氧酶的酶特异性由加氧酶组分α亚基的C末端区域决定。
J Bacteriol. 1998 Mar;180(5):1194-9. doi: 10.1128/JB.180.5.1194-1199.1998.
3
Identification and modification of biphenyl dioxygenase sequences that determine the specificity of polychlorinated biphenyl degradation.确定多氯联苯降解特异性的联苯双加氧酶序列的鉴定与修饰。
Appl Environ Microbiol. 1997 Aug;63(8):3096-103. doi: 10.1128/aem.63.8.3096-3103.1997.
4
Functional analyses of a variety of chimeric dioxygenases constructed from two biphenyl dioxygenases that are similar structurally but different functionally.对由两种结构相似但功能不同的联苯双加氧酶构建的多种嵌合双加氧酶进行功能分析。
J Bacteriol. 1997 Jun;179(12):3936-43. doi: 10.1128/jb.179.12.3936-3943.1997.
5
Cloning and sequencing of the genes encoding 2-nitrotoluene dioxygenase from Pseudomonas sp. JS42.来自假单胞菌属菌株JS42的编码2-硝基甲苯双加氧酶的基因的克隆与测序。
Gene. 1996 Nov 28;181(1-2):57-61. doi: 10.1016/s0378-1119(96)00462-3.
6
Structure-function analysis of the bacterial aromatic ring-hydroxylating dioxygenases.细菌芳香环羟化双加氧酶的结构-功能分析
Adv Microb Physiol. 1997;38:47-84. doi: 10.1016/s0065-2911(08)60155-1.
7
Toluene and ethylbenzene oxidation by purified naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4.由假单胞菌属菌株NCIB 9816-4的纯化萘双加氧酶催化的甲苯和乙苯氧化反应
Appl Environ Microbiol. 1996 Sep;62(9):3101-6. doi: 10.1128/aem.62.9.3101-3106.1996.
8
Rapid purification of the oxygenase component of toluene dioxygenase from a polyol-responsive monoclonal antibody.从一种多元醇反应性单克隆抗体中快速纯化甲苯双加氧酶的加氧酶组分。
Appl Environ Microbiol. 1996 Jun;62(6):2133-7. doi: 10.1128/aem.62.6.2133-2137.1996.
9
2,4-Dinitrotoluene dioxygenase from Burkholderia sp. strain DNT: similarity to naphthalene dioxygenase.来自伯克霍尔德氏菌属菌株DNT的2,4-二硝基甲苯双加氧酶:与萘双加氧酶的相似性。
J Bacteriol. 1996 Aug;178(16):4926-34. doi: 10.1128/jb.178.16.4926-4934.1996.
10
Site-directed mutagenesis of conserved amino acids in the alpha subunit of toluene dioxygenase: potential mononuclear non-heme iron coordination sites.甲苯二加氧酶α亚基中保守氨基酸的定点诱变:潜在的单核非血红素铁配位位点
J Bacteriol. 1996 Jun;178(11):3133-9. doi: 10.1128/jb.178.11.3133-3139.1996.