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肥睡鼠(Glis glis)的完整线粒体DNA序列:啮齿动物并系性的进一步证据

Complete mitochondrial DNA sequence of the fat dormouse, Glis glis: further evidence of rodent paraphyly.

作者信息

Reyes A, Pesole G, Saccone C

机构信息

Centro di Studio sui Mitochondri e Metabolismo Energetico, Bari, Italy.

出版信息

Mol Biol Evol. 1998 May;15(5):499-505. doi: 10.1093/oxfordjournals.molbev.a025949.

DOI:10.1093/oxfordjournals.molbev.a025949
PMID:9580978
Abstract

The complete mitochondrial genome of the fat dormouse, Glis glis, has been sequenced (16,602 bp). A total of 23 complete mitochondrial mammalian genomes have been taken into account for phylogenetic reconstruction. Phylogenetic analyses were performed with parsimony, distance (stationary Markov model), and maximum-likelihood methods. In all cases, data strongly support the paraphyly of rodents, with dormouse and guinea pig in a different clade from rat and mouse, reaching bootstrap values of 95%. Rodent monophyly and the existence of Glires (Rodentia and Lagomorpha) are weakly supported, with maximum bootstrap values of 11% and 8.6%, respectively. This result agrees with the analyses of isochore patterns in the nuclear genome and the B2 and B2-like retroposons, which show a close relationship between dormice and guinea pigs rather than between dormice and rats and mice.

摘要

肥睡鼠(Glis glis)的完整线粒体基因组已被测序(16,602碱基对)。共有23个完整的哺乳动物线粒体基因组被纳入系统发育重建分析。采用简约法、距离法(固定马尔可夫模型)和最大似然法进行系统发育分析。在所有情况下,数据都有力地支持啮齿动物的并系性,睡鼠和豚鼠与大鼠和小鼠处于不同的进化枝,自展值达到95%。啮齿动物的单系性和Glires(啮齿目和兔形目)的存在得到的支持较弱,最大自展值分别为11%和8.6%。这一结果与核基因组中等位基因模式以及B2和B2样逆转座子的分析结果一致,这些分析表明睡鼠与豚鼠之间关系密切,而非睡鼠与大鼠和小鼠之间。

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