Montero-Morán G M, Horjales E, Calcagno M L, Altamirano M M
Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México (UNAM), Mexico City.
Biochemistry. 1998 May 26;37(21):7844-9. doi: 10.1021/bi972755x.
The involvement of tyrosine residues in the allosteric function of the enzyme glucosamine 6-phosphate deaminase from Escherichia coli was first proposed on the basis of a theoretical analysis of the sequence and demonstrated by spectrophotometric experiments. Two tyrosine residues, Tyr121 and Tyr254, were indicated as involved in the mechanism of cooperativity and in the allosteric regulation of the enzyme [Altamirano et al. (1994) Eur. J. Biochem. 220, 409-413]. Tyr121 replacement by threonine or tryptophan altered the symmetric character of the T --> R transition [Altamirano et al. (1995) Biochemistry 34, 6074-6082]. From crystallographic data of the R allosteric conformer, Tyr254 has been shown to be part of the allosteric pocket [Oliva et al. (1995) Structure 3, 1323-1332]. Although it is not directly involved in binding the allosteric activator, N-acetylglucosamine 6-phosphate, Tyr 254 is hydrogen bonded through its phenolic hydroxyl to the backbone carbonyl from residue 161 in the neighboring polypeptide chain. Kinetic and binding experiments with the mutant form Tyr254-Phe of the enzyme reveal that this replacement caused an uncoupling of the homotropic and heterotropic effects. Homotropic cooperativity diminished and the allosteric activation pattern changed from one of the K-type in the wild-type deaminase to a mixed K-V pattern. On the other hand, Tyr254-Trp deaminase is kinetically closer to a K-type enzyme and it has a higher catalytic efficiency than the wild-type protein. These results show that the interactions of Tyr254 are fundamental in coupling binding in the active site to events occurring in the allosteric pocket of E. coli glucosamine 6-P deaminase.
基于对序列的理论分析,首次提出酪氨酸残基参与大肠杆菌葡糖胺6-磷酸脱氨酶的变构功能,并通过分光光度实验得以证明。两个酪氨酸残基Tyr121和Tyr254被指出参与协同机制和该酶的变构调节[阿尔塔米拉诺等人(1994年)《欧洲生物化学杂志》220卷,409 - 413页]。用苏氨酸或色氨酸取代Tyr121改变了T→R转变的对称特征[阿尔塔米拉诺等人(1995年)《生物化学》34卷,6074 - 6082页]。从R变构构象体的晶体学数据来看,Tyr254已被证明是变构口袋的一部分[奥利瓦等人(1995年)《结构》3卷,1323 - 1332页]。虽然Tyr254不直接参与结合变构激活剂6-磷酸-N-乙酰葡糖胺,但它通过其酚羟基与相邻多肽链中161位残基的主链羰基形成氢键。对该酶的突变形式Tyr254-Phe进行的动力学和结合实验表明,这种取代导致了同向协同效应和异向协同效应的解偶联。同向协同性降低,变构激活模式从野生型脱氨酶的K型转变为混合K-V型。另一方面,Tyr254-Trp脱氨酶在动力学上更接近K型酶,并且其催化效率比野生型蛋白更高。这些结果表明,Tyr254的相互作用对于将活性位点的结合与大肠杆菌葡糖胺6-磷酸脱氨酶变构口袋中发生的事件相偶联至关重要。