Hirabayashi J, Dutta S K, Kasai K
Department of Biological Chemistry, Faculty of Pharmaceutical Sciences, Teikyo University, Sagamiko, Kanagawa 199-0195, Japan.
J Biol Chem. 1998 Jun 5;273(23):14450-60. doi: 10.1074/jbc.273.23.14450.
Novel type lectins were found in the phylum Annelida, i.e. in the earthworm, tubifex, leech, and lugworm. The lectins (29-31 kDa) were extracted from the worms without the use of detergent and purified by affinity chromatography on asialofetuin-agarose. On the basis of the partial primary structures of the earthworm Lumbricus terrestris 29-kDa lectin (EW29), degenerate primers were synthesized for use in the reverse transcriptase-polymerase chain reaction. An amplified 155-base pair fragment was used to screen a cDNA library. Four types of full-length clones were obtained, all of which encoded 260 amino acids, but which were found to differ at 29 nucleotide positions. Since three of them resulted in non-silent substitutions, EW29 mRNA was considered to be a mixture of at least three distinct polynucleotides encoding the following proteins: Ala44-Gln197-Ile213 (clone 5), Gly44-Gln197-Val213 (clone 7), and Ala44-His197-Ile213 (clones 8 and 9; different at the nucleotide level, but encoding an identical polypeptide). Genomic polymerase chain reaction using DNA from a single worm revealed that the single worm already had four sets of cDNAs. The EW29 protein showed two features. First, the lectin was composed of two homologous domains (14,500 Da) showing 27% identity with each other. When each of the domains was separately expressed in Escherichia coli, the C-terminal domain was found to bind to asialofetuin-agarose as strongly as the whole protein, whereas the N-terminal domain did not bind and only retardation was observed. EW29 was found to exist as a monomer under non-denaturing conditions. It had significant hemagglutinating activity, which was inhibited by a wide range of galactose-containing saccharides. Second, EW29 contained multiple short conserved motifs, "Gly-X-X-X-Gln-X-Trp." Similar motifs have been found in many carbohydrate-recognizing proteins from an extensive variety of organisms, e.g. plant lectin ricin B-chain and Clostridium botulinum 33-kDa hemagglutinin. Therefore, these carbohydrate-recognition proteins appear to form a protein superfamily.
在环节动物门中发现了新型凝集素,即在蚯蚓、颤蚓、水蛭和沙蠋中。这些凝集素(29 - 31 kDa)是在不使用去污剂的情况下从蠕虫中提取的,并通过在去唾液酸胎球蛋白 - 琼脂糖上进行亲和层析进行纯化。基于蚯蚓(Lumbricus terrestris)29 kDa凝集素(EW29)的部分一级结构,合成了简并引物用于逆转录聚合酶链反应。一个扩增的155个碱基对的片段被用于筛选cDNA文库。获得了四种全长克隆,所有克隆都编码260个氨基酸,但发现在29个核苷酸位置上存在差异。由于其中三个导致了非同义替换,EW29 mRNA被认为是至少三种不同多核苷酸的混合物,它们编码以下蛋白质:Ala44 - Gln197 - Ile213(克隆5)、Gly44 - Gln197 - Val213(克隆7)以及Ala44 - His197 - Ile213(克隆8和9;在核苷酸水平上不同,但编码相同的多肽)。使用来自单个蠕虫的DNA进行基因组聚合酶链反应表明,单个蠕虫已经有四组cDNA。EW29蛋白表现出两个特征。首先,该凝集素由两个同源结构域(14,500 Da)组成,彼此之间具有27%的同一性。当每个结构域分别在大肠杆菌中表达时,发现C末端结构域与去唾液酸胎球蛋白 - 琼脂糖的结合能力与整个蛋白质一样强,而N末端结构域不结合,仅观察到滞留现象。EW29在非变性条件下以单体形式存在。它具有显著的血凝活性,这种活性受到多种含半乳糖糖类的抑制。其次,EW29包含多个短的保守基序“Gly - X - X - X - Gln - X - Trp”。在来自广泛生物体的许多碳水化合物识别蛋白中都发现了类似的基序,例如植物凝集素蓖麻毒蛋白B链和肉毒梭菌33 kDa血凝素。因此,这些碳水化合物识别蛋白似乎形成了一个蛋白质超家族。