Department of Biology, Massachusetts Institute of Technology, 31 Ames Street, Cambridge, Massachusetts 02142, United States.
Microbiology Graduate Program, Massachusetts Institute of Technology, 31 Ames Street, Cambridge, Massachusetts 02142, United States.
ACS Chem Biol. 2021 Oct 15;16(10):1795-1813. doi: 10.1021/acschembio.0c00880. Epub 2021 Jan 26.
The influences of glycans impact all biological processes, disease states, and pathogenic interactions. Glycan-binding proteins (GBPs), such as lectins, are decisive tools for interrogating glycan structure and function because of their ease of use and ability to selectively bind defined carbohydrate epitopes and glycosidic linkages. GBP reagents are prominent tools for basic research, clinical diagnostics, therapeutics, and biotechnological applications. However, the study of glycans is hindered by the lack of specific and selective protein reagents to cover the massive diversity of carbohydrate structures that exist in nature. In addition, existing GBP reagents often suffer from low affinity or broad specificity, complicating data interpretation. There have been numerous efforts to expand the GBP toolkit beyond those identified from natural sources through protein engineering, to improve the properties of existing GBPs or to engineer novel specificities and potential applications. This review details the current scope of proteins that bind carbohydrates and the engineering methods that have been applied to enhance the affinity, selectivity, and specificity of binders.
聚糖的影响贯穿所有的生物过程、疾病状态和致病相互作用。糖结合蛋白(GBP),如凝集素,是研究糖结构和功能的决定性工具,因为它们易于使用,并且能够选择性地结合特定的碳水化合物表位和糖苷键。GBP 试剂是基础研究、临床诊断、治疗和生物技术应用的重要工具。然而,由于缺乏能够覆盖自然界中存在的大量碳水化合物结构的特异性和选择性蛋白试剂,糖的研究受到了阻碍。此外,现有的 GBP 试剂往往存在亲和力低或特异性广泛的问题,这使得数据解释变得复杂。人们已经做出了许多努力,通过蛋白质工程将 GBP 工具包扩展到那些从天然来源中鉴定出来的工具包之外,以提高现有 GBP 的特性,或设计新的特异性和潜在的应用。本综述详细介绍了目前结合碳水化合物的蛋白质的范围,以及已经应用于提高结合物亲和力、选择性和特异性的工程方法。