Lee D A, Goodfellow J M
Department of Crystallography, Birkbeck College, University of London, United Kingdom.
Biophys J. 1998 Jun;74(6):2747-59. doi: 10.1016/S0006-3495(98)77983-4.
A reduction in pH induces the release of iron from transferrin in a process that involves a conformational change in the protein from a closed to an open form. Experimental evidence suggests that there must be changes in the protonation states of certain, as yet not clearly identified, residues in the protein accompanying this conformational change. Such changes in protonation states of residues and the consequent changes in electrostatic interactions are assumed to play a large part in the mechanism of release of iron from transferrin. Using the x-ray crystal structures of human ferri- and apo-lactoferrin, we calculated the pKa values of the titratable residues in both the closed (iron-loaded) and open (iron-free) conformations with a continuum electrostatic model. With the knowledge of a residue's pKa value, its most probable protonation state at any specified pH may be determined. The preliminary results presented here are in good agreement with the experimental observation that the binding of ferric iron and the synergistic anion bicarbonate/carbonate results in the release of approximately three H+ ions. It is suggested that the release of these three H+ ions may be accounted for, in most part, by the deprotonation of the bicarbonate and residues Tyr-92, Lys-243, Lys-282, and Lys-285 together with the protonation of residues Asp-217 and Lys-277.
pH值降低会促使转铁蛋白释放铁,这一过程涉及蛋白质从封闭构象转变为开放构象的构象变化。实验证据表明,伴随这种构象变化,蛋白质中某些尚未明确鉴定的残基的质子化状态必定会发生改变。残基质子化状态的这种变化以及随之而来的静电相互作用的变化,被认为在转铁蛋白释放铁的机制中起很大作用。利用人乳铁蛋白和脱铁乳铁蛋白的X射线晶体结构,我们用连续静电模型计算了封闭(铁负载)和开放(无铁)构象中可滴定残基的pKa值。了解残基的pKa值后,就可以确定其在任何指定pH值下最可能的质子化状态。此处给出的初步结果与实验观察结果高度一致,即三价铁离子与协同阴离子碳酸氢根/碳酸根结合会导致大约三个H⁺离子的释放。有人提出,这三个H⁺离子的释放大部分可能是由于碳酸氢根以及残基Tyr-92、Lys-243、Lys-282和Lys-285的去质子化,以及残基Asp-217和Lys-277的质子化。