• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

木质素过氧化物酶中色氨酸171的β位碳原子上羟基的自催化形成。

Autocatalytic formation of a hydroxy group at C beta of trp171 in lignin peroxidase.

作者信息

Blodig W, Doyle W A, Smith A T, Winterhalter K, Choinowski T, Piontek K

机构信息

Laboratory of Biochemistry I, Swiss Federal Institute of Technology (ETH), Zürich, Switzerland.

出版信息

Biochemistry. 1998 Jun 23;37(25):8832-8. doi: 10.1021/bi9727186.

DOI:10.1021/bi9727186
PMID:9636023
Abstract

In the high-resolution crystal structures of two lignin peroxidase isozymes from the white rot fungus Phanerochaete chrysosporium a significant electron density at single bond distance from the C beta of Trp171 was observed and interpreted as a hydroxy group. To further clarify the nature of this feature, we carried out tryptic digestion of the enzyme and isolated the Trp171 containing peptide. Under ambient conditions, this peptide shows an absorbance spectrum typical of tryptophan. At elevated temperature, however, the formation of an unusual absorbance spectrum with lambda max = 333 nm can be followed that is identical to that of N-acetyl-alpha, beta-didehydrotryptophanamide, resulting upon water elimination from beta-hydroxy tryptophan. The Trp171 containing tryptic peptide isolated from the recombinant and refolded lignin peroxidase produced from Escherichia coli does not contain the characteristic 333 nm absorbance band at any temperature. However, treatment with 3 equiv of H2O2 leads to complete hydroxylation of Trp171. Reducing substrates compete with this process, e.g., in the presence of 0.5 mM veratryl alcohol, about 7 equiv of H2O2 is necessary for complete modification. We conclude that the hydroxylation at the C beta of Trp171 is an autocatalytic reaction which occurs readily under conditions of natural turnover, e.g., in the ligninolytic cultures of P. chrysosporium, which are known to contain an oxidase-based H2O2-generating system. No dependence on dioxygen was found for this oxidative process. Chemical modification of fungal lignin peroxidase with the tryptophan-specific agent N-bromo succinimide leads to a drastically reduced activity with respect to the substrate veratryl alcohol. This suggests that Trp171 is involved in catalysis and that electron transfer from this surface residue to the oxidized heme cofactor is possible under steady-state conditions.

摘要

在来自白腐真菌黄孢原毛平革菌的两种木质素过氧化物酶同工酶的高分辨率晶体结构中,观察到在距Trp171的Cβ单键距离处有显著的电子密度,并将其解释为一个羟基。为了进一步阐明这一特征的性质,我们对该酶进行了胰蛋白酶消化,并分离出含Trp171的肽段。在环境条件下,该肽段显示出典型的色氨酸吸收光谱。然而,在升高的温度下,可以观察到形成了一种不寻常的吸收光谱,其最大吸收波长λmax = 333 nm,这与β-羟基色氨酸脱水后生成的N-乙酰-α,β-二脱氢色氨酸酰胺的吸收光谱相同。从大肠杆菌产生的重组和重折叠木质素过氧化物酶中分离出的含Trp171的胰蛋白酶肽段在任何温度下都不含有特征性的333 nm吸收带。然而,用3当量的H2O2处理会导致Trp171完全羟基化。还原底物会与这一过程竞争,例如,在存在0.5 mM藜芦醇的情况下,完全修饰大约需要7当量的H2O2。我们得出结论,Trp171的Cβ羟基化是一种自催化反应,在自然周转条件下很容易发生,例如在黄孢原毛平革菌的木质素分解培养物中,已知该培养物含有基于氧化酶的H2O2生成系统。未发现该氧化过程对双原子氧有依赖性。用色氨酸特异性试剂N-溴代琥珀酰亚胺对真菌木质素过氧化物酶进行化学修饰,会导致其对底物藜芦醇的活性大幅降低。这表明Trp171参与催化作用,并且在稳态条件下,该表面残基向氧化的血红素辅因子的电子转移是可能的。

相似文献

1
Autocatalytic formation of a hydroxy group at C beta of trp171 in lignin peroxidase.木质素过氧化物酶中色氨酸171的β位碳原子上羟基的自催化形成。
Biochemistry. 1998 Jun 23;37(25):8832-8. doi: 10.1021/bi9727186.
2
Crystal structures of pristine and oxidatively processed lignin peroxidase expressed in Escherichia coli and of the W171F variant that eliminates the redox active tryptophan 171. Implications for the reaction mechanism.在大肠杆菌中表达的原始和氧化处理的木质素过氧化物酶以及消除氧化还原活性色氨酸171的W171F变体的晶体结构。对反应机制的影响。
J Mol Biol. 2001 Jan 26;305(4):851-61. doi: 10.1006/jmbi.2000.4346.
3
Two substrate interaction sites in lignin peroxidase revealed by site-directed mutagenesis.定点突变揭示木质素过氧化物酶中的两个底物相互作用位点。
Biochemistry. 1998 Oct 27;37(43):15097-105. doi: 10.1021/bi981633h.
4
Evidence from spin-trapping for a transient radical on tryptophan residue 171 of lignin peroxidase.自旋捕获法提供的证据表明,木质素过氧化物酶的色氨酸残基171上存在一个瞬态自由基。
Arch Biochem Biophys. 1999 Oct 1;370(1):86-92. doi: 10.1006/abbi.1999.1365.
5
Versatile peroxidase oxidation of high redox potential aromatic compounds: site-directed mutagenesis, spectroscopic and crystallographic investigation of three long-range electron transfer pathways.高氧化还原电位芳香族化合物的多功能过氧化物酶氧化:三种长程电子转移途径的定点诱变、光谱学和晶体学研究
J Mol Biol. 2005 Nov 25;354(2):385-402. doi: 10.1016/j.jmb.2005.09.047. Epub 2005 Oct 3.
6
Addition of veratryl alcohol oxidase activity to manganese peroxidase by site-directed mutagenesis.通过定点诱变将藜芦醇氧化酶活性添加到锰过氧化物酶中。
Biochem Biophys Res Commun. 1999 Mar 24;256(3):500-4. doi: 10.1006/bbrc.1999.0360.
7
The crystal structure of lignin peroxidase at 1.70 A resolution reveals a hydroxy group on the cbeta of tryptophan 171: a novel radical site formed during the redox cycle.分辨率为1.70埃的木质素过氧化物酶晶体结构揭示了色氨酸171的β碳原子上的一个羟基:这是在氧化还原循环过程中形成的一个新的自由基位点。
J Mol Biol. 1999 Feb 26;286(3):809-27. doi: 10.1006/jmbi.1998.2507.
8
Lignin peroxidase structure and function.木质素过氧化物酶的结构与功能。
Biochem Soc Trans. 2001 May;29(Pt 2):111-6. doi: 10.1042/0300-5127:0290111.
9
Molecular characterization of lignin peroxidase from the white-rot basidiomycete Trametes cervina: a novel fungal peroxidase.白腐菌栓菌木质素过氧化物酶的分子特征:一种新型真菌过氧化物酶。
FEMS Microbiol Lett. 2010 Mar;304(1):39-46. doi: 10.1111/j.1574-6968.2009.01880.x. Epub 2009 Dec 17.
10
Site-directed mutagenesis of the catalytic tryptophan environment in Pleurotus eryngii versatile peroxidase.杏鲍菇多功能过氧化物酶催化色氨酸环境的定点诱变
Biochemistry. 2008 Feb 12;47(6):1685-95. doi: 10.1021/bi7020298. Epub 2008 Jan 18.

引用本文的文献

1
Understanding the Key Roles of pH Buffer in Accelerating Lignin Degradation by Lignin Peroxidase.了解pH缓冲剂在加速木质素过氧化物酶降解木质素中的关键作用。
JACS Au. 2023 Jan 24;3(2):536-549. doi: 10.1021/jacsau.2c00649. eCollection 2023 Feb 27.
2
Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi.广泛采样担子菌基因组表明,白腐菌/褐腐菌范式不适用于木材腐朽真菌。
Proc Natl Acad Sci U S A. 2014 Jul 8;111(27):9923-8. doi: 10.1073/pnas.1400592111. Epub 2014 Jun 23.
3
Heme enzyme structure and function.
血红素酶的结构与功能。
Chem Rev. 2014 Apr 9;114(7):3919-62. doi: 10.1021/cr400415k. Epub 2014 Jan 8.
4
First crystal structure of a fungal high-redox potential dye-decolorizing peroxidase: substrate interaction sites and long-range electron transfer.真菌高氧化还原电位染料脱色过氧化物酶的首个晶体结构:底物相互作用位点和长程电子转移。
J Biol Chem. 2013 Feb 8;288(6):4095-102. doi: 10.1074/jbc.M112.400176. Epub 2012 Dec 12.
5
Heme destruction, the main molecular event during the peroxide-mediated inactivation of chloroperoxidase from Caldariomyces fumago.血红素的破坏,是在过氧化物介导的黄孢原毛平革菌漆酶失活过程中的主要分子事件。
J Biol Inorg Chem. 2011 Jan;16(1):63-8. doi: 10.1007/s00775-010-0702-6. Epub 2010 Sep 12.
6
Thirty years of heme peroxidase structural biology.血红素过氧化物酶结构生物学的三十年。
Arch Biochem Biophys. 2010 Aug 1;500(1):3-12. doi: 10.1016/j.abb.2010.02.008. Epub 2010 Mar 3.
7
Molecular dynamics simulations of lignin peroxidase in solution.木质素过氧化物酶在溶液中的分子动力学模拟
Biophys J. 2003 Jun;84(6):3883-93. doi: 10.1016/s0006-3495(03)75116-9.
8
Reversible alkaline inactivation of lignin peroxidase involves the release of both the distal and proximal site calcium ions and bishistidine co-ordination of the haem.木质素过氧化物酶的可逆碱性失活涉及远端和近端位点钙离子的释放以及血红素的双组氨酸配位。
Biochem J. 1999 Nov 15;344 Pt 1(Pt 1):237-44.
9
Direct interaction of lignin and lignin peroxidase from Phanerochaete chrysosporium.黄孢原毛平革菌中木质素与木质素过氧化物酶的直接相互作用。
Proc Natl Acad Sci U S A. 1999 Mar 2;96(5):1989-94. doi: 10.1073/pnas.96.5.1989.