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利用定点诱变、晶体学和动力学溶剂同位素效应来理解细胞色素P450cam中关键天冬氨酸251的作用。

Understanding the role of the essential Asp251 in cytochrome p450cam using site-directed mutagenesis, crystallography, and kinetic solvent isotope effect.

作者信息

Vidakovic M, Sligar S G, Li H, Poulos T L

机构信息

Department of Biochemistry, Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign 61801, USA.

出版信息

Biochemistry. 1998 Jun 30;37(26):9211-9. doi: 10.1021/bi980189f.

DOI:10.1021/bi980189f
PMID:9649301
Abstract

Proton transfer in cytochromes P450 is a critical step in the activation of molecular oxygen. Extensive study of the P450cam active site has identified several residues that play a central role in dioxygen bond scission. A highly conserved carboxylate, aspartate-251 in P450cam in the distal helix I, participates in a series of hydrogen-bond/ion pairs near the molecular surface and has been implicated in the catalytic mechanism. Mutation of Asp251 is known to lower activity by 2 orders of magnitude and change the rate-limiting step in the catalytic cycle, suggesting a role for an acid functionality in generation of iron-oxygen reactive intermediates. The turnover rates of the Asp251Asn mutant in various protium-deuterium mixtures have been determined and show a significantly larger kinetic solvent isotope effect, with an overall magnitude of 10 compared to 1.8 for the wild-type P450cam. In addition, a much larger number of protons are involved in the rate-limiting step for the Asp251Asn mutant than in the wild-type enzyme. These results indicate that Asp251 is an essential part of the normal proton delivery machinery required for O-O bond scission. The crystal structure of the Aps251Asn mutant obtained from data collected at cryogenic temperatures has been refined to 1.9 A. Key hydrogen bonds required to hold Asp251 in position have been broken which allows the mutant Asn251 side chain to swing out and away from the O2 binding site leading to a more open active site. This change could allow easier access by water and thus contribute to the observed kinetic solvent isotope effects.

摘要

细胞色素P450中的质子转移是分子氧激活过程中的关键步骤。对P450cam活性位点的广泛研究已确定了几个在双氧键断裂中起核心作用的残基。一个高度保守的羧酸盐,即P450cam中位于远端螺旋I的天冬氨酸-251,参与了分子表面附近的一系列氢键/离子对,并与催化机制有关。已知天冬氨酸251的突变会使活性降低2个数量级,并改变催化循环中的限速步骤,这表明酸性官能团在铁-氧反应中间体的生成中起作用。已测定了天冬氨酸251天冬酰胺突变体在各种氢-氘混合物中的周转速率,结果显示其动力学溶剂同位素效应明显更大,总体幅度为10,而野生型P450cam为1.8。此外,与野生型酶相比,天冬氨酸251天冬酰胺突变体的限速步骤涉及的质子数要多得多。这些结果表明,天冬氨酸251是O-O键断裂所需的正常质子传递机制的重要组成部分。从低温下收集的数据获得的Aps251Asn突变体的晶体结构已精修至1.9埃。维持天冬氨酸251位置所需的关键氢键已断裂,这使得突变体天冬酰胺251侧链摆动并远离O2结合位点,导致活性位点更加开放。这种变化可能使水更容易进入,从而导致观察到的动力学溶剂同位素效应。

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