Smith A B
Department of Palaeontology, The Natural History Museum, Cromwell Road, London, SW7 5BD, United Kingdom.
Mol Phylogenet Evol. 1998 Jun;9(3):437-47. doi: 10.1006/mpev.1998.0488.
Palaeontology provides the only direct record for morphological and genetic change through time and uniquely contributes to systematics in two ways: by providing access to denser taxon sampling than is otherwise possible and by dating divergence times. Claims that ancient DNA has survived millions of years in certain fossils suggested the possibility that palaeontology could contribute directly to molecular systematic studies. Unfortunately, none of the supposed geologically ancient DNA records stands up to detailed scrutiny and fossils therefore contribute primarily through the morphological information they preserve. Denser taxon sampling can improve the accuracy of phylogenetic estimates primarily through allowing better discrimination of homoplasy from homology. This in turn leads to more accurate hypotheses of character transformation. Denser taxon sampling also offers the opportunity for more accurate rooting, since more characters can be polarized by reference to a stem-group taxon than to an extant sister-group taxon. Missing data can be a problem for fossils, but is not crippling. Finally the temporal order of clade appearances in the fossil record can provide ancillary evidence for selecting a working phylogeny from among a number of equally most parsimonious cladograms.
古生物学提供了唯一一份关于形态和基因随时间变化的直接记录,并以两种独特方式对系统学做出贡献:通过获取比其他方式更密集的分类单元样本,以及通过测定分歧时间。声称古代DNA在某些化石中保存了数百万年,这表明古生物学有可能直接为分子系统学研究做出贡献。不幸的是,所有所谓的地质历史悠久的DNA记录都经不起详细审查,因此化石主要通过它们所保存的形态信息发挥作用。更密集的分类单元样本主要通过更好地区分同功相似性和同源性来提高系统发育估计的准确性。这反过来又能得出更准确的性状转变假说。更密集的分类单元样本也为更准确地确定根节点提供了机会,因为与现存的姐妹类群分类单元相比,参考干群分类单元可以使更多性状极化。缺失数据对化石来说可能是个问题,但并非致命。最后,化石记录中类群出现的时间顺序可以为从多个同样最简约的分支图中选择一个可行的系统发育提供辅助证据。