Pérez J M, Kriek J, Dijk J, Canters G W, Möller W
Department of Molecular Cell Biology, Sylvius Laboratory, Leiden University Medical Centre, Wassenaarseweg 72, Leiden, 2333 AL, The Netherlands.
Protein Expr Purif. 1998 Jul;13(2):259-67. doi: 10.1006/prep.1998.0895.
Two guanine nucleotide exchange domains, corresponding to the C-terminal region of the human translational elongation factor EF-1beta (which consists of 225 amino acids), were produced by DNA recombinant overexpression techniques in Escherichia coli. We describe here a fast and efficient method for purifying these two protein fragments and for concentrating their solutions rapidly to a level as high as 25 mg/ml. This technique permitted the isolation of 20-30 mg of pure, native protein per liter of bacterial culture. Both fragments were able to form a complex with their natural substrate, elongation factor EF-1alpha, as detected by gel filtration experiments. The domain of 110 residues was slightly more active than the 91-amino-acid domain in guanine nucleotide exchange assays. Folding and stability of the two C-terminal domains were explored by circular dichroism (CD) and NMR spectroscopy. In spite of optimal conditions concerning NaCl concentration, temperature, and pH, during the NMR experiments both proteins showed signs of aggregation after approximately 7 days at 303 degreesK, a time period and temperature required for future heteronuclear NMR experiments. Also, the longer fragment suffered from proteolysis in the N-terminal region, suggestive of flexibility in that part of the structure. The secondary structure content for these two EF-1beta fragments was estimated, using data from both CD and NMR. The results of both methods agree very well and indicate for each fragment the presence of approximately 20% alpha-helix and approximately 50% beta-sheet. Elucidation of the three-dimensional structure of the exchange domain of EF-1beta by NMR spectroscopy appears therefore feasible.
通过DNA重组过表达技术在大肠杆菌中产生了两个鸟嘌呤核苷酸交换结构域,它们对应于人翻译延伸因子EF-1β的C末端区域(由225个氨基酸组成)。我们在此描述一种快速有效的方法,用于纯化这两个蛋白质片段并将其溶液迅速浓缩至高达25mg/ml的水平。该技术每升细菌培养物可分离出20 - 30mg纯的天然蛋白质。通过凝胶过滤实验检测发现,这两个片段都能够与其天然底物延伸因子EF-1α形成复合物。在鸟嘌呤核苷酸交换测定中,110个残基的结构域比91个氨基酸的结构域活性略高。通过圆二色性(CD)和核磁共振(NMR)光谱研究了这两个C末端结构域的折叠和稳定性。尽管在NaCl浓度、温度和pH方面处于最佳条件,但在NMR实验期间,两种蛋白质在303K下大约7天后都显示出聚集迹象,这是未来异核NMR实验所需的时间和温度。此外,较长的片段在N末端区域发生了蛋白水解,表明该结构部分具有灵活性。利用CD和NMR的数据估算了这两个EF-1β片段的二级结构含量。两种方法的结果非常吻合,表明每个片段中大约存在20%的α-螺旋和约50%的β-折叠。因此,通过NMR光谱阐明EF-1β交换结构域的三维结构似乎是可行的。