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奇异变形杆菌xerD基因的克隆与鉴定

Cloning and characterisation of the Proteus mirabilis xerD gene.

作者信息

Villion M, Szatmari G

机构信息

Dèpartement de Microbiologie et Immunologie, Université de Montréal, Que., Canada.

出版信息

FEMS Microbiol Lett. 1998 Jul 1;164(1):83-90. doi: 10.1111/j.1574-6968.1998.tb13071.x.

DOI:10.1111/j.1574-6968.1998.tb13071.x
PMID:9675854
Abstract

The Xer site-specific recombination system is involved in the stable maintenance of replicons (certain plasmids and chromosomes) in Escherichia coli and other bacteria by converting multimers into monomers. This system requires a cis-acting DNA sequence (the chromosomal dif site or the ColE1 cer site) and two trans-acting factors: the XerC and XerD recombinases, which belong to the lambda integrase family of tyrosine site-specific recombinases. In addition, in order to resolve plasmid multimers into monomers, two additional factors are required: the ArgR and PepA proteins. We have previously shown the presence of xerC and xerD genes (and their function) by Southern hybridisation and by in vivo recombination in a wide variety of Enterobacteriaceac. We have now cloned and sequenced the xerD gene of Proteus mirabilis using degenerate and inverse PCR methods. This gene encodes a tyrosine recombinase which is highly similar to the E. coli XerD recombinase, is capable of complementing an E. coli xerD mutant, and displays sequence-specific DNA binding activity.

摘要

Xer位点特异性重组系统通过将多聚体转化为单体,参与大肠杆菌和其他细菌中复制子(某些质粒和染色体)的稳定维持。该系统需要一个顺式作用DNA序列(染色体dif位点或ColE1 cer位点)和两个反式作用因子:XerC和XerD重组酶,它们属于酪氨酸位点特异性重组酶的λ整合酶家族。此外,为了将质粒多聚体分解为单体,还需要另外两个因子:ArgR和PepA蛋白。我们之前通过Southern杂交和在多种肠杆菌科细菌中的体内重组,证明了xerC和xerD基因的存在(及其功能)。我们现在使用简并PCR和反向PCR方法克隆并测序了奇异变形杆菌的xerD基因。该基因编码一种酪氨酸重组酶,与大肠杆菌XerD重组酶高度相似,能够互补大肠杆菌xerD突变体,并表现出序列特异性DNA结合活性。

相似文献

1
Cloning and characterisation of the Proteus mirabilis xerD gene.奇异变形杆菌xerD基因的克隆与鉴定
FEMS Microbiol Lett. 1998 Jul 1;164(1):83-90. doi: 10.1111/j.1574-6968.1998.tb13071.x.
2
The XerC recombinase of Proteus mirabilis: characterization and interaction with other tyrosine recombinases.奇异变形杆菌的XerC重组酶:特性及其与其他酪氨酸重组酶的相互作用。
FEMS Microbiol Lett. 2003 Sep 12;226(1):65-71. doi: 10.1016/S0378-1097(03)00577-9.
3
Detection of XerC and XerD recombinases in gram-negative bacteria of the family Enterobacteriaceae.在肠杆菌科革兰氏阴性菌中检测XerC和XerD重组酶。
J Bacteriol. 1995 Jul;177(14):4183-6. doi: 10.1128/jb.177.14.4183-4186.1995.
4
DNA sequence of recombinase-binding sites can determine Xer site-specific recombination outcome.重组酶结合位点的DNA序列能够决定Xer位点特异性重组的结果。
Mol Microbiol. 1997 Jan;23(2):387-98. doi: 10.1046/j.1365-2958.1997.2261600.x.
5
C-terminal interactions between the XerC and XerD site-specific recombinases.XerC和XerD位点特异性重组酶之间的C端相互作用。
Mol Microbiol. 1999 Jun;32(5):1031-42. doi: 10.1046/j.1365-2958.1999.01418.x.
6
Structure-function correlations in the XerD site-specific recombinase revealed by pentapeptide scanning mutagenesis.通过五肽扫描诱变揭示的XerD位点特异性重组酶中的结构-功能相关性。
J Mol Biol. 1997 Nov 21;274(1):39-53. doi: 10.1006/jmbi.1997.1380.
7
Determinants of selectivity in Xer site-specific recombination.Xer位点特异性重组中选择性的决定因素。
Genes Dev. 1996 Mar 15;10(6):762-73. doi: 10.1101/gad.10.6.762.
8
Xer recombination in Escherichia coli. Site-specific DNA topoisomerase activity of the XerC and XerD recombinases.大肠杆菌中的Xer重组。XerC和XerD重组酶的位点特异性DNA拓扑异构酶活性。
J Biol Chem. 1997 Aug 29;272(35):21927-31. doi: 10.1074/jbc.272.35.21927.
9
Two related recombinases are required for site-specific recombination at dif and cer in E. coli K12.在大肠杆菌K12中,dif和cer位点特异性重组需要两种相关的重组酶。
Cell. 1993 Oct 22;75(2):351-61. doi: 10.1016/0092-8674(93)80076-q.
10
Stability by multimer resolution of pJHCMW1 is due to the Tn1331 resolvase and not to the Escherichia coli Xer system.pJHCMW1通过多聚体解离实现的稳定性归因于Tn1331解离酶,而非大肠杆菌Xer系统。
Microbiology (Reading). 2000 Mar;146 ( Pt 3):581-589. doi: 10.1099/00221287-146-3-581.

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The ripX locus of Bacillus subtilis encodes a site-specific recombinase involved in proper chromosome partitioning.
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J Bacteriol. 1999 Oct;181(19):6053-62. doi: 10.1128/JB.181.19.6053-6062.1999.