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XRCC4缺陷细胞中的V(D)J重组中间体和非标准产物。

V(D)J recombination intermediates and non-standard products in XRCC4-deficient cells.

作者信息

Han J O, Erskine L A, Purugganan M M, Stamato T D, Roth D B

机构信息

The Department of Microbiology and Immunology, Baylor College of Medicine and The Howard Hughes Medical Institute, Baylor College of Medicine, Houston, TX 77030, USA.

出版信息

Nucleic Acids Res. 1998 Aug 15;26(16):3769-75. doi: 10.1093/nar/26.16.3769.

DOI:10.1093/nar/26.16.3769
PMID:9685494
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC147771/
Abstract

V(D)J recombination assembles immunoglobulin (Ig) and T cell receptor (TCR) gene segments during lymphocyte development. Recombination is initiated by the RAG-1 and RAG-2 proteins, which introduce double-stranded DNA breaks (DSB) adjacent to the Ig and TCR gene segments. The broken ends are joined by the DSB repair machinery, which includes the XRCC4 protein. While XRCC4 is essential for both DSB repair and V(D)J recombination, the functions of this protein remain enigmatic. Because the rare V(D)J recombination products isolated from XRCC4-deficient cells generally show evidence of excessive nucleotide loss, it was hypothesized that XRCC4 may function to protect broken DNA ends. Here we report the first examination of V(D)J recombination intermediates in XRCC4-deficient cells. We found that both types of intermediates, signal ends and coding ends, are abundant in the absence of XRCC4. Furthermore, the signal ends are full length. We also showed that alternative V(D)J recombination products, hybrid joints, form with normal efficiency and without excessive deletion in XRCC4-deficient cells. These data indicate that impaired formation of V(D)J recombination products in XRCC4-deficient cells does not result from excessive degradation of recombination intermediates. Potential roles of XRCC4 in the joining reaction are discussed.

摘要

V(D)J重排过程在淋巴细胞发育期间组装免疫球蛋白(Ig)和T细胞受体(TCR)基因片段。重排由RAG-1和RAG-2蛋白启动,它们在Ig和TCR基因片段附近引入双链DNA断裂(DSB)。断裂末端由包括XRCC4蛋白在内的DSB修复机制连接起来。虽然XRCC4对DSB修复和V(D)J重排都至关重要,但该蛋白的功能仍然成谜。由于从XRCC4缺陷细胞中分离出的罕见V(D)J重排产物通常显示出过度核苷酸缺失的证据,因此推测XRCC4可能起到保护断裂DNA末端的作用。在此我们报告了对XRCC4缺陷细胞中V(D)J重排中间体的首次检测。我们发现,在缺乏XRCC4的情况下,两种类型的中间体,即信号末端和编码末端,都大量存在。此外,信号末端是全长的。我们还表明,在XRCC4缺陷细胞中,替代性V(D)J重排产物,即杂交接头,以正常效率形成且没有过度缺失。这些数据表明,XRCC4缺陷细胞中V(D)J重排产物形成受损并非源于重排中间体的过度降解。我们讨论了XRCC4在连接反应中的潜在作用。

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2
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Ku80 is required for addition of N nucleotides to V(D)J recombination junctions by terminal deoxynucleotidyl transferase.末端脱氧核苷酸转移酶向V(D)J重组连接点添加N核苷酸需要Ku80。
Nucleic Acids Res. 2001 Apr 1;29(7):1638-46. doi: 10.1093/nar/29.7.1638.
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Activation of V(D)J recombination induces the formation of interlocus joints and hybrid joints in scid pre-B-cell lines.V(D)J重组的激活在严重联合免疫缺陷前B细胞系中诱导基因座间连接和杂交连接的形成。
Mol Cell Biol. 2000 Oct;20(19):7170-7. doi: 10.1128/MCB.20.19.7170-7177.2000.
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Receptor revision of immunoglobulin heavy chain variable region genes in normal human B lymphocytes.正常人B淋巴细胞中免疫球蛋白重链可变区基因的受体修正
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Analysis of variable (diversity) joining recombination in DNAdependent protein kinase (DNA-PK)-deficient mice reveals DNA-PK-independent pathways for both signal and coding joint formation.对DNA依赖性蛋白激酶(DNA-PK)缺陷小鼠中可变(多样性)连接重组的分析揭示了信号和编码连接形成的不依赖DNA-PK的途径。
Proc Natl Acad Sci U S A. 1998 Dec 22;95(26):15559-64. doi: 10.1073/pnas.95.26.15559.

本文引用的文献

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Rejoining of DNA by the RAG1 and RAG2 proteins.由RAG1和RAG2蛋白介导的DNA重新连接。
Science. 1998 Apr 10;280(5361):301-3. doi: 10.1126/science.280.5361.301.
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The XRCC4 gene product is a target for and interacts with the DNA-dependent protein kinase.XRCC4基因产物是DNA依赖性蛋白激酶的作用靶点并与其相互作用。
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Mammalian DNA double-strand break repair protein XRCC4 interacts with DNA ligase IV.哺乳动物DNA双链断裂修复蛋白XRCC4与DNA连接酶IV相互作用。
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Nature. 1997 Jul 31;388(6641):492-5. doi: 10.1038/41358.
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Initiation of V(D)J recombination in vivo: role of recombination signal sequences in formation of single and paired double-strand breaks.体内V(D)J重组的起始:重组信号序列在单链和配对双链断裂形成中的作用。
EMBO J. 1997 May 15;16(10):2656-64. doi: 10.1093/emboj/16.10.2656.
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Ku86 is not required for protection of signal ends or for formation of nonstandard V(D)J recombination products.保护信号末端或形成非标准V(D)J重组产物并不需要Ku86。
Mol Cell Biol. 1997 Apr;17(4):2226-34. doi: 10.1128/MCB.17.4.2226.
9
RAG1 and RAG2 form a stable postcleavage synaptic complex with DNA containing signal ends in V(D)J recombination.在V(D)J重组过程中,RAG1和RAG2与含有信号末端的DNA形成稳定的切割后突触复合体。
Cell. 1997 Apr 4;89(1):43-53. doi: 10.1016/s0092-8674(00)80181-6.
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The 12/23 rule is enforced at the cleavage step of V(D)J recombination in vivo.12/23规则在体内V(D)J重组的切割步骤中起作用。
Genes Cells. 1996 Jun;1(6):543-53. doi: 10.1046/j.1365-2443.1996.d01-259.x.