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作为乳酸乳球菌色氨酸操纵子抗终止关键元件的色氨酸转运核糖核酸

tRNATrp as a key element of antitermination in the Lactococcus lactis trp operon.

作者信息

van de Guchte M, Ehrlich D S, Chopin A

机构信息

Laboratoire de Génétique Microbienne, Institut National de la Recherche Agronomique, Jouy-en-Josas, France.

出版信息

Mol Microbiol. 1998 Jul;29(1):61-74. doi: 10.1046/j.1365-2958.1998.00903.x.

Abstract

The expression of the trp operon of Lactococcus lactis is regulated in response to tryptophan availability by a mechanism of transcription antitermination. We present evidence in support of a previously described model involving tRNATrp as a key element in the sensing of tryptophan levels and the realization of the regulatory response to tryptophan limitation. In agreement with this model, two sites of presumed direct interaction between the trp leader transcript and tRNATrp are found to be of crucial importance for efficient antitermination. These correspond to the specifier codon, which presumably interacts with the anticodon in the tRNA, and a sequence complementary to, and presumably interacting with, the acceptor stem of the tRNA. Through these interactions, uncharged tRNATrp is believed to stabilize an antiterminator conformation of the trp leader transcript, thus allowing transcription and expression of the structural genes of the operon. For the first time, we present direct evidence that it is the ratio of uncharged to charged tRNA that is important for the regulation of antitermination, rather than the absolute amount of uncharged tRNA. In addition, our results indicate that the codon-anticodon interaction, although contributing largely to the efficiency of the regulatory response, is not strictly indispensable, which suggests the existence of additional interactions between mRNA and tRNA. Finally, we describe a possible additional level of regulation, superimposed and dependent on tRNA-mediated anti-termination control, that is based on the processing of the trp leader transcript. Together with the regulation mechanisms described earlier for the Escherichia coli and Bacillus subtilis trp operons, this constitutes the third different mechanism of transcript elongation control found to be involved in the regulation of an operon of which the structural genes are highly conserved.

摘要

乳酸乳球菌色氨酸操纵子的表达通过转录抗终止机制响应色氨酸的可用性进行调控。我们提供的证据支持了先前描述的一个模型,该模型涉及色氨酸转运RNA(tRNATrp)作为感知色氨酸水平以及实现对色氨酸限制的调节反应的关键元件。与该模型一致,发现色氨酸前导转录本与tRNATrp之间两个推测的直接相互作用位点对于有效的抗终止至关重要。这些位点对应于特定密码子,推测其与tRNA中的反密码子相互作用,以及一段与tRNA接受茎互补且推测相互作用的序列。通过这些相互作用,未负载氨基酸的tRNATrp被认为可稳定色氨酸前导转录本的抗终止构象,从而允许操纵子结构基因的转录和表达。我们首次提供直接证据表明,对于抗终止的调控而言,未负载氨基酸与负载氨基酸的tRNA的比例很重要,而非未负载氨基酸的tRNA的绝对量。此外,我们的结果表明,密码子 - 反密码子相互作用虽然在很大程度上有助于调节反应的效率,但并非严格不可或缺,这表明mRNA与tRNA之间存在其他相互作用。最后,我们描述了一种可能的额外调控水平,它叠加在tRNA介导的抗终止控制之上并依赖于此,该调控基于色氨酸前导转录本的加工。连同先前描述的大肠杆菌和枯草芽孢杆菌色氨酸操纵子的调控机制,这构成了发现参与结构基因高度保守的操纵子调控的第三种不同的转录延伸控制机制。

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