Merigeau K, Arnoux B, Perahia D, Norris K, Norris F, Ducruix A
Laboratoire d'Enzymologie et Biochimie Structurales, CNRS, 91198 Gif sur Yvette CEDEX, France.
Acta Crystallogr D Biol Crystallogr. 1998 May 1;54(Pt 3):306-12. doi: 10.1107/s0907444997010846.
The recombinant Kunitz-type domain (C5) of human collagen alpha3(VI) chain was previously described at 1.6 A resolution at room temperature. By changing the crystallization conditions and using synchrotron radiation, we are able to record diffraction data to 1.2 A resolution for crystals of the same space group at 291 K. The protein-water-ion model has been refined anisotropically against these new data using the program SHELXL93; the results converged to an R factor of 15.0%, with all data between 7 and 1.2 A. The final electron-density map reveals a clear chain tracing with a few disordered residues and five residues out of 58 that present alternate conformations. The Cys14-Cys38 bond presents the less frequently observed left-hand conformation (chi1 = -60 degrees). The solvent molecules and a phosphate ion are well ordered with an average B of 38 A2. The high-resolution structure reveals the N and C termini which were missing from the 1.6 A structure.
人胶原蛋白α3(VI)链的重组库尼茨型结构域(C5)先前已在室温下以1.6埃分辨率进行了描述。通过改变结晶条件并使用同步辐射,我们能够在291K下为相同空间群的晶体记录分辨率达到1.2埃的衍射数据。已使用SHELXL93程序针对这些新数据对蛋白质-水-离子模型进行了各向异性精修;结果收敛至15.0%的R因子,所有数据范围在7至1.2埃之间。最终的电子密度图显示出清晰的链迹,有一些无序残基,并且58个残基中有5个呈现出交替构象。Cys14-Cys38键呈现出较少见的左手构象(χ1 = -60°)。溶剂分子和一个磷酸根离子排列有序,平均B因子为38埃²。高分辨率结构揭示了1.6埃结构中缺失的N端和C端。