• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

对抗HIV-1蛋白酶耐药性:与XV638和SD146(具有广泛特异性的环状脲酰胺)复合的突变蛋白酶的结构分析

Counteracting HIV-1 protease drug resistance: structural analysis of mutant proteases complexed with XV638 and SD146, cyclic urea amides with broad specificities.

作者信息

Ala P J, Huston E E, Klabe R M, Jadhav P K, Lam P Y, Chang C H

机构信息

Experimental Station, DuPont Pharmaceuticals, Wilmington, Delaware 19880, USA.

出版信息

Biochemistry. 1998 Oct 27;37(43):15042-9. doi: 10.1021/bi980386e.

DOI:10.1021/bi980386e
PMID:9790666
Abstract

The long-term therapeutic benefit of HIV antiretroviral therapy is still threatened by drug-resistant variants. Mutations in the S1 subsite of the protease are the primary cause for the loss of sensitivity toward many HIV protease inhibitors, including our first-generation cyclic urea-based inhibitors DMP323 and DMP450. We now report the structures of the three active-site mutant proteases V82F, I84V, and V82F/I84V in complex with XV638 and SD146, two P2 analogues of DMP323 that are 8-fold more potent against the wild type and are able to inhibit a broad panel of drug-resistant variants [Jadhav, P. K., et al. (1997) J. Med. Chem. 40, 181-191]. The increased efficacy of XV638 and SD146 is due primarily to an increase in P2-S2 interactions: 30-40% more van der Waals contacts and two to four additional hydrogen bonds. Furthermore, because these new interactions do not perturb other subsites in the protease, it appears that the large complementary surface areas of their P2 substituents compensate for the loss of P1-S1 interactions and reduce the probability of selecting for drug-resistant variants.

摘要

艾滋病毒抗逆转录病毒疗法的长期治疗益处仍受到耐药变异体的威胁。蛋白酶S1亚位点的突变是对许多艾滋病毒蛋白酶抑制剂(包括我们的第一代基于环脲的抑制剂DMP323和DMP450)敏感性丧失的主要原因。我们现在报告了三种活性位点突变蛋白酶V82F、I84V和V82F/I84V与XV638和SD146形成复合物的结构,XV638和SD146是DMP323的两种P2类似物,对野生型的效力高8倍,并且能够抑制多种耐药变异体[贾德哈夫,P.K.等人(1997年)《药物化学杂志》40卷,第181 - 191页]。XV638和SD146效力增加主要是由于P2 - S2相互作用增强:范德华接触增加30 - 40%,并且额外增加了两到四个氢键。此外,由于这些新的相互作用不会干扰蛋白酶中的其他亚位点,其P2取代基的大互补表面积似乎弥补了P1 - S1相互作用的损失,并降低了选择耐药变异体的可能性。

相似文献

1
Counteracting HIV-1 protease drug resistance: structural analysis of mutant proteases complexed with XV638 and SD146, cyclic urea amides with broad specificities.对抗HIV-1蛋白酶耐药性:与XV638和SD146(具有广泛特异性的环状脲酰胺)复合的突变蛋白酶的结构分析
Biochemistry. 1998 Oct 27;37(43):15042-9. doi: 10.1021/bi980386e.
2
Molecular basis of HIV-1 protease drug resistance: structural analysis of mutant proteases complexed with cyclic urea inhibitors.HIV-1蛋白酶耐药性的分子基础:与环脲抑制剂复合的突变蛋白酶的结构分析
Biochemistry. 1997 Feb 18;36(7):1573-80. doi: 10.1021/bi962234u.
3
Cyclic urea amides: HIV-1 protease inhibitors with low nanomolar potency against both wild type and protease inhibitor resistant mutants of HIV.环状脲酰胺:对HIV野生型和蛋白酶抑制剂抗性突变体均具有低纳摩尔效力的HIV-1蛋白酶抑制剂。
J Med Chem. 1997 Jan 17;40(2):181-91. doi: 10.1021/jm960586t.
4
A structural and thermodynamic escape mechanism from a drug resistant mutation of the HIV-1 protease.一种针对HIV-1蛋白酶耐药性突变的结构和热力学逃逸机制。
Proteins. 2004 May 15;55(3):594-602. doi: 10.1002/prot.20069.
5
A major role for a set of non-active site mutations in the development of HIV-1 protease drug resistance.一组非活性位点突变在HIV-1蛋白酶耐药性发展中起主要作用。
Biochemistry. 2003 Jan 28;42(3):631-8. doi: 10.1021/bi027019u.
6
Molecular recognition of cyclic urea HIV-1 protease inhibitors.
J Biol Chem. 1998 May 15;273(20):12325-31. doi: 10.1074/jbc.273.20.12325.
7
Optimization and computational evaluation of a series of potential active site inhibitors of the V82F/I84V drug-resistant mutant of HIV-1 protease: an application of the relaxed complex method of structure-based drug design.针对HIV-1蛋白酶V82F/I84V耐药突变体的一系列潜在活性位点抑制剂的优化与计算评估:基于结构的药物设计中松弛复合物方法的应用
Chem Biol Drug Des. 2006 May;67(5):336-45. doi: 10.1111/j.1747-0285.2006.00382.x.
8
Thermodynamic basis of resistance to HIV-1 protease inhibition: calorimetric analysis of the V82F/I84V active site resistant mutant.HIV-1蛋白酶抑制抗性的热力学基础:V82F/I84V活性位点抗性突变体的量热分析
Biochemistry. 2000 Oct 3;39(39):11876-83. doi: 10.1021/bi001013s.
9
Molecular dynamics and free energy studies on the wild-type and double mutant HIV-1 protease complexed with amprenavir and two amprenavir-related inhibitors: mechanism for binding and drug resistance.野生型和双突变型HIV-1蛋白酶与安普那韦及两种安普那韦相关抑制剂复合的分子动力学和自由能研究:结合及耐药机制
J Med Chem. 2007 Mar 22;50(6):1177-88. doi: 10.1021/jm0609162. Epub 2007 Feb 15.
10
Resistance to HIV protease inhibitors: a comparison of enzyme inhibition and antiviral potency.对HIV蛋白酶抑制剂的耐药性:酶抑制作用与抗病毒效力的比较。
Biochemistry. 1998 Jun 16;37(24):8735-42. doi: 10.1021/bi972555l.

引用本文的文献

1
Solving molecular docking problems with multi-objective metaheuristics.使用多目标元启发式算法解决分子对接问题。
Molecules. 2015 Jun 2;20(6):10154-83. doi: 10.3390/molecules200610154.
2
Can cyclic HIV protease inhibitors bind in a non-preferred form? An ab initio, DFT and MM-PB(GB)SA study.环状 HIV 蛋白酶抑制剂能否以非优先形式结合?从头算、DFT 和 MM-PB(GB)SA 研究。
J Mol Model. 2013 Mar;19(3):1125-42. doi: 10.1007/s00894-012-1660-4. Epub 2012 Nov 13.
3
Proteochemometric modeling of the bioactivity spectra of HIV-1 protease inhibitors by introducing protein-ligand interaction fingerprint.
通过引入蛋白质-配体相互作用指纹,对 HIV-1 蛋白酶抑制剂的生物活性谱进行了定量构效关系建模。
PLoS One. 2012;7(7):e41698. doi: 10.1371/journal.pone.0041698. Epub 2012 Jul 27.
4
Multiple receptor conformation docking and dock pose clustering as tool for CoMFA and CoMSIA analysis - a case study on HIV-1 protease inhibitors.多种受体构象对接和对接构象聚类作为 CoMFA 和 CoMSIA 分析的工具 - 以 HIV-1 蛋白酶抑制剂为例。
J Mol Model. 2012 Feb;18(2):569-82. doi: 10.1007/s00894-011-1048-x. Epub 2011 May 6.
5
Computational study of the resistance shown by the subtype B/HIV-1 protease to currently known inhibitors.B 亚型/HIV-1 蛋白酶耐药性的计算研究:目前已知抑制剂的耐药性。
Biochemistry. 2010 May 18;49(19):4283-95. doi: 10.1021/bi100569u.
6
Protein folding liquid chromatography and its recent developments.蛋白质折叠液相色谱及其最新进展。
J Chromatogr B Analyt Technol Biomed Life Sci. 2007 Apr 15;849(1-2):69-80. doi: 10.1016/j.jchromb.2006.10.068. Epub 2006 Nov 20.
7
Role of invariant Thr80 in human immunodeficiency virus type 1 protease structure, function, and viral infectivity.保守性苏氨酸80在1型人类免疫缺陷病毒蛋白酶结构、功能及病毒感染性中的作用
J Virol. 2006 Jul;80(14):6906-16. doi: 10.1128/JVI.01900-05.
8
Structural and thermodynamic basis for the binding of TMC114, a next-generation human immunodeficiency virus type 1 protease inhibitor.下一代1型人类免疫缺陷病毒蛋白酶抑制剂TMC114结合的结构和热力学基础
J Virol. 2004 Nov;78(21):12012-21. doi: 10.1128/JVI.78.21.12012-12021.2004.
9
Comparative study of some energetic and steric parameters of the wild type and mutants HIV-1 protease: a way to explain the viral resistance.野生型和突变型HIV-1蛋白酶的一些能量和空间参数的比较研究:解释病毒抗性的一种方法。
J Cell Mol Med. 2002 Apr-Jun;6(2):251-60. doi: 10.1111/j.1582-4934.2002.tb00192.x.
10
Overcoming drug resistance in HIV-1 chemotherapy: the binding thermodynamics of Amprenavir and TMC-126 to wild-type and drug-resistant mutants of the HIV-1 protease.克服HIV-1化疗中的耐药性:安普那韦和TMC-126与HIV-1蛋白酶野生型及耐药突变体的结合热力学
Protein Sci. 2002 Aug;11(8):1908-16. doi: 10.1110/ps.0206402.