Benning M M, Wesenberg G, Liu R, Taylor K L, Dunaway-Mariano D, Holden H M
Department of Biochemistry, College of Agricultural and Life Sciences, University of Wisconsin- Madison, Madison, Wisconsin 53705, USA.
J Biol Chem. 1998 Dec 11;273(50):33572-9. doi: 10.1074/jbc.273.50.33572.
The soil-dwelling microbe, Pseudomonas sp. strain CBS-3, has attracted recent attention due to its ability to survive on 4-chlorobenzoate as its sole carbon source. The biochemical pathway by which this organism converts 4-chlorobenzoate to 4-hydroxybenzoate consists of three enzymes: 4-chlorobenzoyl-CoA ligase, 4-chlorobenzoyl-CoA dehalogenase, and 4-hydroxybenzoyl-CoA thioesterase. Here we describe the three-dimensional structure of the thioesterase determined to 2.0-A resolution. Each subunit of the homotetramer is characterized by a five-stranded anti-parallel beta-sheet and three major alpha-helices. While previous amino acid sequence analyses failed to reveal any similarity between this thioesterase and other known proteins, the results from this study clearly demonstrate that the molecular architecture of 4-hydroxybenzoyl-CoA thioesterase is topologically equivalent to that observed for beta-hydroxydecanoyl thiol ester dehydrase from Escherichia coli. On the basis of the structural similarity between these two enzymes, the active site of the thioesterase has been identified and a catalytic mechanism proposed.
土壤微生物假单胞菌属菌株CBS - 3最近因其能够以4 - 氯苯甲酸作为唯一碳源生存而受到关注。该生物体将4 - 氯苯甲酸转化为4 - 羟基苯甲酸的生化途径由三种酶组成:4 - 氯苯甲酰辅酶A连接酶、4 - 氯苯甲酰辅酶A脱卤酶和4 - 羟基苯甲酰辅酶A硫酯酶。在此,我们描述了硫酯酶的三维结构,其分辨率为2.0埃。同四聚体的每个亚基的特征是一个五链反平行β - 折叠和三个主要的α - 螺旋。虽然先前的氨基酸序列分析未能揭示该硫酯酶与其他已知蛋白质之间的任何相似性,但本研究结果清楚地表明,4 - 羟基苯甲酰辅酶A硫酯酶的分子结构在拓扑学上与大肠杆菌β - 羟基癸酰硫醇酯脱水酶的结构相同。基于这两种酶之间的结构相似性,已确定了硫酯酶的活性位点并提出了催化机制。