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詹博拉纳病病毒tat基因及其长末端重复序列中的顺式和反式调控元件的特征分析。

Characterization of the Jembrana disease virus tat gene and the cis- and trans-regulatory elements in its long terminal repeats.

作者信息

Chen H, Wilcox G, Kertayadnya G, Wood C

机构信息

School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588, USA.

出版信息

J Virol. 1999 Jan;73(1):658-66. doi: 10.1128/JVI.73.1.658-666.1999.

Abstract

Jembrana disease virus (JDV) is a newly identified bovine lentivirus that is closely related to the bovine immunodeficiency virus (BIV). JDV contains a tat gene, encoded by two exons, which has potent transactivation activity. Cotransfection of the JDV tat expression plasmid with the JDV promoter chloramphenicol acetyltransferase (CAT) construct pJDV-U3R resulted in a substantial increase in the level of CAT mRNA transcribed from the JDV long terminal repeat (LTR) and a dramatic increase in the CAT protein level. Deletion analysis of the LTR sequences showed that sequences spanning nucleotides -68 to +53, including the TATA box and the predicted first stem-loop structure of the predicted Tat response element (TAR), were required for efficient transactivation. The results, derived from site-directed mutagenesis experiments, suggested that the base pairing in the stem of the first stem-loop structure in the TAR region was important for JDV Tat-mediated transactivation; in contrast, nucleotide substitutions in the loop region of JDV TAR had less effect. For the JDV LTR, upstream sequences, from nucleotide -196 and beyond, as well as the predicted secondary structures in the R region, may have a negative effect on basal JDV promoter activity. Deletion of these regions resulted in a four- to fivefold increase in basal expression. The JDV Tat is also a potent transactivator of other animal and primate lentivirus promoters. It transactivated BIV and human immunodeficiency virus type 1 (HIV-1) LTRs to levels similar to those with their homologous Tat proteins. In contrast, HIV-1 Tat has minimal effects on JDV LTR expression, whereas BIV Tat moderately transactivated the JDV LTR. Our study suggests that JDV may use a mechanism of transactivation similar but not identical to those of other animal and primate lentiviruses.

摘要

杰姆布拉纳病病毒(JDV)是一种新发现的牛慢病毒,与牛免疫缺陷病毒(BIV)密切相关。JDV含有一个由两个外显子编码的tat基因,该基因具有强大的反式激活活性。将JDV tat表达质粒与JDV启动子氯霉素乙酰转移酶(CAT)构建体pJDV-U3R共转染,导致从JDV长末端重复序列(LTR)转录的CAT mRNA水平大幅增加,CAT蛋白水平显著提高。对LTR序列的缺失分析表明,有效反式激活需要跨越核苷酸-68至+53的序列,包括TATA盒和预测的Tat反应元件(TAR)的第一个茎环结构。定点诱变实验的结果表明,TAR区域第一个茎环结构茎部的碱基配对对于JDV Tat介导的反式激活很重要;相比之下,JDV TAR环区域的核苷酸取代影响较小。对于JDV LTR,从核苷酸-196及更远的上游序列以及R区域的预测二级结构可能对基础JDV启动子活性有负面影响。删除这些区域导致基础表达增加四到五倍。JDV Tat也是其他动物和灵长类慢病毒启动子的有效反式激活剂。它将BIV和1型人类免疫缺陷病毒(HIV-1)LTR反式激活到与其同源Tat蛋白相似的水平。相比之下,HIV-1 Tat对JDV LTR表达的影响最小,而BIV Tat适度反式激活JDV LTR。我们的研究表明,JDV可能使用一种与其他动物和灵长类慢病毒相似但不完全相同的反式激活机制。

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