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两种RNA寡核苷酸的晶体结构与溶液结构比较

Comparison of the crystal and solution structures of two RNA oligonucleotides.

作者信息

Rife J P, Stallings S C, Correll C C, Dallas A, Steitz T A, Moore P B

机构信息

Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107 USA.

出版信息

Biophys J. 1999 Jan;76(1 Pt 1):65-75. doi: 10.1016/S0006-3495(99)77178-X.

Abstract

Until recently, there were no examples of RNAs whose structures had been determined by both NMR and x-ray crystallography, and thus there was no experimental basis for assessing the accuracy of RNA solution structures. A comparison of the solution and the crystal structures of two RNAs is presented, which demonstrates that NMR can produce solution structures that resemble crystal structures and thus validates the application to RNA of a methodology developed initially for the determination of protein conformations. Models for RNA solution structures are appreciably affected by the parameters used for their refinement that describe intramolecular interactions. For the RNAs of interest here, the more realistic those parameters, the greater the similarity between solution structures and crystal structures.

摘要

直到最近,还没有通过核磁共振(NMR)和X射线晶体学两种方法确定其结构的RNA实例,因此也就没有评估RNA溶液结构准确性的实验依据。本文展示了两种RNA的溶液结构与晶体结构的比较,结果表明核磁共振可以产生与晶体结构相似的溶液结构,从而验证了最初为确定蛋白质构象而开发的一种方法在RNA上的应用。RNA溶液结构模型会受到用于优化的描述分子内相互作用的参数的显著影响。对于这里所关注的RNA,这些参数越符合实际情况,溶液结构与晶体结构之间的相似度就越高。

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本文引用的文献

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Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):57-64. doi: 10.1107/S0907444995011115.
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