Priat C, Hitte C, Vignaux F, Renier C, Jiang Z, Jouquand S, Chéron A, André C, Galibert F
Faculté de Médecine, UPR 41 CNRS Recombinaisons Génétiques, 2 avenue du Professeur Léon Bernard, Rennes Cedex, 35043, France.
Genomics. 1998 Dec 15;54(3):361-78. doi: 10.1006/geno.1998.5602.
A whole genome radiation hybrid (RH) map of the canine genome was constructed by typing 400 markers, including 218 genes and 182 microsatellites, on a panel of 126 radiation hybrid cell lines. Fifty-seven RH groups have been determined with lod scores greater than 6, and 180 framework landmarks were ordered with odds greater than 1000:1. Average spacing between adjacent markers is 23 cR5000, an estimated physical distance of 3.8 Mb. Fourteen groups have been assigned to 9 of the canine chromosomes, and a comparison of RH and genetic groups allowed the successful bridging of both types of data on one map composed of 31 RH and 13 syntenic RH groups. Comparison of canine, human, mouse, and pig maps underlined regions of conserved synteny. This integrated map, covering an estimated 80% of the dog genome, should prove a powerful tool for localizing and identifiying genes implicated in pathological and phenotypical traits.
通过在一组126个辐射杂种细胞系上对400个标记(包括218个基因和182个微卫星)进行分型,构建了犬基因组的全基因组辐射杂种(RH)图谱。已确定57个RH组的lod分数大于6,180个框架标记按大于1000:1的优势排序。相邻标记之间的平均间距为23 cR5000,估计物理距离为3.8 Mb。14个组已被分配到9条犬染色体上,RH组与遗传组的比较使得两种类型的数据在由31个RH组和13个同线RH组组成的一张图谱上成功衔接。犬、人、小鼠和猪图谱的比较突出了保守同线性区域。这张覆盖估计80%犬基因组的整合图谱,应会成为定位和鉴定与病理及表型特征相关基因的有力工具。