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甲烷营养菌、甲基弯曲菌OB3b、可溶性甲烷单加氧酶及其在生物修复中的应用。

Methanotrophs, Methylosinus trichosporium OB3b, sMMO, and their application to bioremediation.

作者信息

Sullivan J P, Dickinson D, Chase H A

机构信息

Biology Department, Imperial College of Science, Technology and Medicine, London.

出版信息

Crit Rev Microbiol. 1998;24(4):335-73. doi: 10.1080/10408419891294217.

DOI:10.1080/10408419891294217
PMID:9887367
Abstract

One of the most problematic groups of the USEPA and EU priority pollutants are the halogenated organic compounds. These substances have a wide range of industrial applications, such as solvents and cleaners. Inadequate disposal techniques and accidental spillages have led to their detection in soil, groundwater, and river sediments. Persistence of these compounds in the environment has resulted from low levels of biodegradation due to chemical structural features that preclude or retard biological attack. Research has indicated the idea that treatment systems based on methanotrophic co-metabolic transformation may be a cost-effective and efficient alternative to physical methods because of the potential for high transformation rates, the possibility of complete compound degradation without the formation of toxic metabolites, applicability to a broad spectrum of compounds, and the use of a widely available and inexpensive growth substrate. A substantial amount of work concerning methanotrophic cometabolic transformations has been carried out using the soluble form of methane monooxygenase (sMMO) from the obligate methanotroph Methylosinus trichosporium OB3b. This NADH-dependent monooxygenase is derepressed when cells are grown under copper stress. sMMO has a wider specificity than the particulate form. sMMO has been shown to degrade trichloroethylene (TCE) at a rate of at least one order of magnitude faster than obtained with other mixed and pure cultures, suggesting it has a wider application to bioremediation. Furthermore, sMMO catalyzes an unusually wide range of oxidation reactions, including the hydroxylation of alkanes, epoxidation of alkenes, ethers, halogenated methanes, cyclic and aromatic compounds including compounds, that are resistant to degradation in the environment. However, the practical application of methantrophs and Methylosinus trichosporium OB3b to the treatment of chlorinated organics has met with mixed success. Although oxidation rates are rapid, compound oxidation with M. trichosporium OB3b is difficult. This fastidious organism grows relatively slowly, which limits the speed with which sMMO expressing biomass can be generated. Furthermore, product toxicity toward the cell, affecting the stability of the enzyme when transforming certain compounds has been observed, for example, by the products of 1,2,3 trichlorobenzene hydroxylation (2,3,4- and 3,4,5-trichlorophenol) and of TCE degradation (chloral hydrate). Because of this toxicity and the inability of sMMO to further oxidize its own hydroxylation products, the ability of methane monoxygenase to carry out the monooxygenation of a wide variety of substituted aromatics and polyaromatics cannot be fully exploited in M. trichosporium OB3b. Many of these problems could be overcome by the use of either a mixed downstream heterotrophic population of organisms that could accommodate the products of hydroxylation or to express sMMO in an organism that could metabolize the products of hydroxylation. The latter of these two approaches would have several advantages. The main benefit would be the removal of the need for methane, which is required to induce sMMO in M. trichosporium OB3b, and supply carbon and energy to the cells that continuously oxidise the target compound, but also acts as a competitive inhibitor of sMMO. Instead, the recombinant could utilize the products of sMMO-mediated hydroxylation as a carbon source.

摘要

美国环境保护局(USEPA)和欧盟优先污染物中最具问题的一类物质是卤代有机化合物。这些物质有广泛的工业应用,如溶剂和清洁剂。处置技术不当和意外泄漏导致它们在土壤、地下水和河流沉积物中被检测到。由于化学结构特征阻碍或延缓生物攻击,导致这些化合物在环境中生物降解水平较低,从而使其在环境中具有持久性。研究表明,基于甲烷营养型共代谢转化的处理系统可能是一种具有成本效益且高效的物理方法替代方案,因为其具有高转化率的潜力、完全降解化合物而不形成有毒代谢物的可能性、适用于广泛的化合物以及使用广泛可得且廉价的生长底物。关于甲烷营养型共代谢转化,已经使用来自专性甲烷营养菌甲基弯曲菌OB3b的可溶性甲烷单加氧酶(sMMO)开展了大量工作。这种依赖烟酰胺腺嘌呤二核苷酸(NADH)的单加氧酶在细胞于铜胁迫下生长时被去阻遏。sMMO比颗粒形式具有更广泛的特异性。已表明sMMO降解三氯乙烯(TCE)的速率比其他混合培养物和纯培养物快至少一个数量级,这表明它在生物修复中有更广泛的应用。此外,sMMO催化异常广泛的氧化反应,包括烷烃的羟基化、烯烃的环氧化、醚、卤代甲烷、环状和芳香族化合物(包括在环境中抗降解的化合物)的氧化。然而,甲烷营养菌和甲基弯曲菌OB3b在处理氯代有机物方面的实际应用成效不一。尽管氧化速率很快,但用甲基弯曲菌OB3b进行化合物氧化很困难。这种苛求的生物体生长相对缓慢,这限制了表达sMMO的生物量的产生速度。此外,已观察到产物对细胞有毒性,例如在1,2,3 - 三氯苯羟基化产物(2,3,4 - 和3,4,5 - 三氯苯酚)和TCE降解产物(水合氯醛)转化某些化合物时影响酶的稳定性。由于这种毒性以及sMMO无法进一步氧化其自身的羟基化产物,甲烷单加氧酶对多种取代芳烃和多环芳烃进行单加氧反应的能力在甲基弯曲菌OB3b中无法得到充分利用。通过使用能够容纳羟基化产物的混合下游异养生物群体或在能够代谢羟基化产物的生物体中表达sMMO,许多这些问题可以得到克服。这两种方法中的后一种将有几个优点。主要好处是无需甲烷,甲烷是在甲基弯曲菌OB3b中诱导sMMO所必需的,它为持续氧化目标化合物的细胞提供碳和能量,但同时也是sMMO的竞争性抑制剂。相反,重组体可以利用sMMO介导的羟基化产物作为碳源。

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