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Multifunctional G-rich and RRM-containing domains of TbRGG2 perform separate yet essential functions in trypanosome RNA editing.锥虫TbRGG2的多功能富含G和含RRM结构域在锥虫RNA编辑中发挥着各自独立但至关重要的功能。
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The zinc-fingers of KREPA3 are essential for the complete editing of mitochondrial mRNAs in Trypanosoma brucei.KREPA3 的锌指对于布氏锥虫线粒体 mRNA 的完全编辑是必需的。
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gRNA结合蛋白gBP21在RNA编辑中的作用——体外和体内分析

The involvement of gRNA-binding protein gBP21 in RNA editing-an in vitro and in vivo analysis.

作者信息

Lambert L, Müller U F, Souza A E, Göringer H U

机构信息

Laboratorium für Molekulare Biologie-Genzentrum der Ludwig-Maximilians-Universität München,Am Klopferspitz 18a, 82152 Martinsried, Germany.

出版信息

Nucleic Acids Res. 1999 Mar 15;27(6):1429-36. doi: 10.1093/nar/27.6.1429.

DOI:10.1093/nar/27.6.1429
PMID:10037802
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC148334/
Abstract

RNA editing in the parasitic organism Trypanosoma brucei is characterised by the insertion and deletion of uridylate residues into otherwise incomplete primary transcripts. The processing reaction is a required pathway for the expression of most mitochondrial genes and proceeds by a cascade of enzyme-catalysed steps. RNA editing involves one or more macromolecular ribonucleoprotein complexes which are likely to interact with additional components as the reaction proceeds. Here we examined the involvement of the gRNA-binding polypeptide gBP21, a protein which has been demonstrated to be associated with active RNA editing complexes. We show that in vitro RNA editing can be suppressed by the addition of a gBP21-specific antibody or by immunodepletion of the protein. By creating a gBP21 knockout mutant we analysed the requirement for the protein in vivo. gBP21(-) trypanosomes are viable as bloodstream stage cells and contain edited mRNAs. However, the knockout mutant is not capable of differentiating from the bloodstream to the insect life cycle stage in vitro. Moreover, mutant cells are characterised by a low mitochondrial transcript abundance. Together, these data establish that gBP21 contributes a non-essential function to the RNA editing reaction and further suggest that the protein is involved in additional mitochondrial processes which impact a larger pool of mitochondrial transcripts.

摘要

寄生生物布氏锥虫中的RNA编辑的特征是在原本不完整的初级转录本中插入和缺失尿苷酸残基。加工反应是大多数线粒体基因表达所必需的途径,通过一系列酶催化步骤进行。RNA编辑涉及一个或多个大分子核糖核蛋白复合体,随着反应的进行,这些复合体可能会与其他成分相互作用。在此,我们研究了与gRNA结合的多肽gBP21的作用,该蛋白已被证明与活跃的RNA编辑复合体相关。我们发现,在体外,添加gBP21特异性抗体或通过免疫去除该蛋白可抑制RNA编辑。通过创建gBP21基因敲除突变体,我们分析了该蛋白在体内的需求。gBP21基因敲除的布氏锥虫作为血流阶段的细胞是存活可行的,并且含有经过编辑的mRNA。然而,该基因敲除突变体在体外无法从血流阶段分化为昆虫生命周期阶段。此外,突变细胞的特征是线粒体转录本丰度较低。总之,这些数据表明gBP21对RNA编辑反应具有非必需功能,并进一步表明该蛋白参与了其他影响更多线粒体转录本的线粒体过程。