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通过15N核磁共振研究谷氨酸棒杆菌铵同化途径中的体内通量。

In vivo fluxes in the ammonium-assimilatory pathways in corynebacterium glutamicum studied by 15N nuclear magnetic resonance.

作者信息

Tesch M, Sahm H

机构信息

Institut fur Biotechnologie, Forschungszentrum Julich GmbH, D-52425 Julich, Germany.

出版信息

Appl Environ Microbiol. 1999 Mar;65(3):1099-109. doi: 10.1128/AEM.65.3.1099-1109.1999.

Abstract

Glutamate dehydrogenase (GDH) and glutamine synthetase (GS)-glutamine 2-oxoglutarate-aminotransferase (GOGAT) represent the two main pathways of ammonium assimilation in Corynebacterium glutamicum. In this study, the ammonium assimilating fluxes in vivo in the wild-type ATCC 13032 strain and its GDH mutant were quantitated in continuous cultures. To do this, the incorporation of 15N label from [15N]ammonium in glutamate and glutamine was monitored with a time resolution of about 10 min with in vivo 15N nuclear magnetic resonance (NMR) used in combination with a recently developed high-cell-density membrane-cyclone NMR bioreactor system. The data were used to tune a standard differential equation model of ammonium assimilation that comprised ammonia transmembrane diffusion, GDH, GS, GOGAT, and glutamine amidotransferases, as well as the anabolic incorporation of glutamate and glutamine into biomass. The results provided a detailed picture of the fluxes involved in ammonium assimilation in the two different C. glutamicum strains in vivo. In both strains, transmembrane equilibration of 100 mM [15N]ammonium took less than 2 min. In the wild type, an unexpectedly high fraction of 28% of the NH4+ was assimilated via the GS reaction in glutamine, while 72% were assimilated by the reversible GDH reaction via glutamate. GOGAT was inactive. The analysis identified glutamine as an important nitrogen donor in amidotransferase reactions. The experimentally determined amount of 28% of nitrogen assimilated via glutamine is close to a theoretical 21% calculated from the high peptidoglycan content of C. glutamicum. In the GDH mutant, glutamate was exclusively synthesized over the GS/GOGAT pathway. Its level was threefold reduced compared to the wild type.

摘要

谷氨酸脱氢酶(GDH)和谷氨酰胺合成酶(GS)-谷氨酰胺2-酮戊二酸转氨酶(GOGAT)代表了谷氨酸棒杆菌中铵同化的两条主要途径。在本研究中,通过连续培养对野生型ATCC 13032菌株及其GDH突变体体内的铵同化通量进行了定量。为此,使用体内15N核磁共振(NMR)结合最近开发的高细胞密度膜旋风NMR生物反应器系统,以约10分钟的时间分辨率监测[15N]铵中15N标记在谷氨酸和谷氨酰胺中的掺入情况。这些数据用于调整铵同化的标准微分方程模型,该模型包括氨跨膜扩散、GDH、GS、GOGAT和谷氨酰胺酰胺转移酶,以及谷氨酸和谷氨酰胺合成生物量的合成代谢掺入。结果提供了两种不同谷氨酸棒杆菌菌株体内铵同化所涉及通量的详细情况。在两种菌株中,100 mM [15N]铵的跨膜平衡时间均不到2分钟。在野生型中,出乎意料的是,28%的NH4+通过谷氨酰胺中的GS反应被同化,而72%通过谷氨酸的可逆GDH反应被同化。GOGAT无活性。分析确定谷氨酰胺是酰胺转移酶反应中的重要氮供体。通过谷氨酰胺实验测定的28%的氮同化量接近根据谷氨酸棒杆菌的高肽聚糖含量计算出的理论值21%。在GDH突变体中,谷氨酸仅通过GS/GOGAT途径合成。其水平比野生型降低了三倍。

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本文引用的文献

1
Response of the central metabolism of Corynebacterium glutamicum to different flux burdens.
Biotechnol Bioeng. 1997 Oct 20;56(2):168-80. doi: 10.1002/(SICI)1097-0290(19971020)56:2<168::AID-BIT6>3.0.CO;2-N.
2
Bidirectional reaction steps in metabolic networks: II. Flux estimation and statistical analysis.
Biotechnol Bioeng. 1997 Jul 5;55(1):118-35. doi: 10.1002/(SICI)1097-0290(19970705)55:1<118::AID-BIT13>3.0.CO;2-I.
3
Bidirectional reaction steps in metabolic networks: I. Modeling and simulation of carbon isotope labeling experiments.
Biotechnol Bioeng. 1997 Jul 5;55(1):101-17. doi: 10.1002/(SICI)1097-0290(19970705)55:1<101::AID-BIT12>3.0.CO;2-P.
4
Development and application of a membrane cyclone reactor for in vivo NMR spectroscopy with high microbial cell densities.
Biotechnol Bioeng. 1996 Sep 20;51(6):624-35. doi: 10.1002/(SICI)1097-0290(19960920)51:6<624::AID-BIT2>3.0.CO;2-J.
5
Reaction engineering analysis of L-lysine transport by Corynebacterium glutamicum.
Biotechnol Bioeng. 1996 Jul 5;51(1):40-50. doi: 10.1002/(SICI)1097-0290(19960705)51:1<40::AID-BIT5>3.0.CO;2-0.
6
Determination of the fluxes in the central metabolism of Corynebacterium glutamicum by nuclear magnetic resonance spectroscopy combined with metabolite balancing.
Biotechnol Bioeng. 1996 Jan 20;49(2):111-29. doi: 10.1002/(SICI)1097-0290(19960120)49:2<111::AID-BIT1>3.0.CO;2-T.
7
Glutamate Dehydrogenase Is Not Essential for Glutamate Formation by Corynebacterium glutamicum.
Appl Environ Microbiol. 1993 Jul;59(7):2329-31. doi: 10.1128/aem.59.7.2329-2331.1993.
8
15N-NMR study of ammonium assimilation in Agaricus bisporus.
Biochim Biophys Acta. 1996 Jan 10;1310(1):74-80. doi: 10.1016/0167-4889(95)00157-3.

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