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辅酶钴胺素(II)的中子劳厄衍射研究

Neutron Laue diffraction studies of coenzyme cob(II)alamin.

作者信息

Langan P, Lehmann M, Wilkinson C, Jogl G, Kratky C

机构信息

Institut Laue Langevin, BP 156, F-38042 Grenoble CEDEX 9, France.

出版信息

Acta Crystallogr D Biol Crystallogr. 1999 Jan;55(Pt 1):51-9. doi: 10.1107/S090744499800660X. Epub 1999 Jan 1.

Abstract

Using a recently designed neutron single-crystal diffractometer utilizing a narrow-band Laue concept (LADI), diffraction data were collected from a crystal of the coenzyme cob(II)alamin (B12r), crystallized from a mixture of D2O and perdeuterated acetone. The instrument was placed at the end of a cold neutron guide at the Institute Laue Langevin (ILL, Grenoble, France), and data collection with neutrons of 1.8-8.0 A wavelength to a crystallographic resolution of 1.43 A was complete after about 36 h. This compares favourably with a previous experiment utilizing the same crystal specimen, where more than four weeks were required to collect monochromatic diffraction data to about 1 A resolution. Using the Laue data, the structure was solved by molecular replacement with the known X-ray crystal structure. Difference density maps revealed the atomic positions (including deuterium atoms) of seven ordered solvent water molecules and two (partially disordered) acetone molecules. These density maps were compared with corresponding maps computed with monochromatic neutron-diffraction data collected to 1. 0 A resolution using the same crystal specimen, as well as to maps derived from high-resolution (0.90 A) synchrotron X-ray data. In spite of the better definition of atomic positions in the two high-resolution maps, the 1.43 A LADI maps show considerable power for the determination of the location of hydrogen and deuterium positions.

摘要

利用最近设计的采用窄带劳厄概念的中子单晶衍射仪(LADI),从辅酶钴胺素(B12r)晶体收集衍射数据,该晶体由重水和全氘代丙酮的混合物结晶而成。该仪器放置在法国格勒诺布尔劳厄 - 朗之万研究所(ILL)的冷中子导管末端,用波长为1.8 - 8.0 Å的中子收集数据,约36小时后完成了至1.43 Å晶体学分辨率的数据收集。这与之前使用相同晶体样本的实验相比很有利,之前收集单色衍射数据至约1 Å分辨率需要四周多时间。利用劳厄数据,通过分子置换并结合已知的X射线晶体结构解析了该结构。差值密度图揭示了七个有序溶剂水分子和两个(部分无序)丙酮分子的原子位置(包括氘原子)。将这些密度图与使用相同晶体样本收集的至1.0 Å分辨率的单色中子衍射数据计算得到的相应图,以及从高分辨率(0.90 Å)同步加速器X射线数据得到的图进行了比较。尽管在两个高分辨率图中原子位置的定义更好,但1.43 Å的LADI图在确定氢和氘位置方面显示出相当大的能力。

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